Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00416 ATGACCGGAGGCCAATGTCACCGGAGGAAGAAGATGAAGTGCAGGGTTGCGGAAGGAGGTTGTGGAACCGAGGACATGCCTTGCCCGGTTTCGAGGGTTCCGGTTAAATCCCTTGGGACCCAACCTGGAAATTCTGATAACTCCCTTGCACTTGATATTGATTACTACTCGCAGGCCATAAAAACGCTTAGTGAGCGCTCGCCTTTTGATGTCGCGGAAGATACTTCAACCTCGACGGTGCCCACACTGCCCAGTGGGTGCGCAAGCTTCTTAAACCGGCATTCTGAGAGTCGTAGGCGCCACAAGAAGTCCCATTCGGGTGCAGACAAGAAATCGTCTAGAACAAGTGAGAAGTCGCGTAGTTCAAGCTTCTGGGTGGAGACTGAGGATTACTTTAGAGACTTGAAATTGCCGGACATAGACACCTTGTTGGAGGCATCATCCCCTTTTAGTTTAGCTGCTCGAAATTGTTTTTCTATTCCACCAGTGGGAAATGATACAAAATCAAATGTAGCCAGTTACGAGGATGACAAGGAGACTGATGGAAACCTAAATAGCGAGGATGTTAAGAATGAGGACCGCGTCATGAAAAGTAACAGTGTTGTAGCTGGAGGCTTGGCTCAGGTTAACAAGGGTCATGATACTTTTGATTCGTCTAGTAGTTTAGAATGGCTTTTAGGGTGTAGGAATAAGAGTTCTCTGATTTCTGAGCCCCCTTCAAAGAGGAGGAAGCTTTTGGGCGGTGAAGCTGGGTTGGAGAAATTCTTTATGGCCGGTCCTTGCGATGGAGACTCTCCTCTGTGCCATTATTGCTGCCGGGGAGACACCGGTAGAGAGTCCAATAAATTAATTGTCTGCGTTATTTGTAAAGTTGCAGTTCATAAGAAGTGCTATGGTGTGCAAGATGATGTAGACGAGTCTTGGTTGTGCTCTTGGTGCAAGCAGAAGGATTGCGTTGATGAAATGGTGCATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCTTTAAAGCCTGTTCATAGACATGCTGAAAGTGTCGGGTCTGTGCAATTTGCCCACTTGTTTTGTTGTTTGTGGATGCCTGAGATTTATATAGAGGATCTGAAGAAGATGGAGCCTGTTATGAATGTAGGAGGAGTCCATGAAACCCGGAAAAAATTAGTCTGTGATATTTGCAAGGTGAAGTTTGGTGCGTGCATTCACTGTTGCCATGGATCTTGCAGGTCTTCTTTCCATCCTCTATGTGCTAGGGAAGCTAGCTACAGTATGGAGGTTTGGGCAAAAAACGATCATGACAATATTGAGTTGCGGGTCTTCTGTTCCAAGCACTCAGATGTACAAGAGAACAGCACCATCTTTTGTAGTGATTTGTCTTCTGCTGACAGCCTTCTGGGAGAAACACAGTGCATTTTGAAAACTGGTTGCCAGAATGGAGATAATATTGGGATATTTTCTGATGGCAGCCCTGATAAATTGAGTCATAGTGAATCACAGGATGGAATGCTGTCTGATTGTCTCTTAAATGCTCACAAAACGTCAGAATGCAGTGGTTTTCCACAACTAAGTAATACTGCAGTGGTGGGGAGGACCGATGAGATTGCCAATGCATCTGACTCCCTTAGTTTTGCACTTGTTTTGAAAAAGCTGATAGATCGAGGGAAAGTTGATCTAAAAAATGTGGCTTTGGAGATTGGCATTTCTTCAGAGACATTAAGCGCAAATATTAATGATCCTTGCATGGCCCCTGATGTGCAACTTAAAATAGTCAACTGGCTAAAAGCTCATGTATATACTAATGCGTCTCAGAGAAGTTTGAAAGTCAAATTCAAGCCTGCCAATTCATCCAAGGCTGAAAATGGAATAACTGATGGTTCTGATACTTTACAGATATCCAATTCCGAGTTGCCAGATCCAGTTGCTGTTAAGTCAGTGCCATCGAGGAGAAGAACAACTGGTAATATCAGAATTTTGAAAGATAACAAAGTGATATGTTCATCTGGGATGGCGTCCAGTGAGAACGAAATGCCAATGGACAAGGTCAAAGGAGGTCAATCTGAACATGAAAATTCCGAAATATCAAATGAAGCATCCATTCCTGATGCAGCTGAAATGGAATTAACCAAGTCTGAGTATGCTTGTTTTGATTCCCAAGGGAATGCTGATGAACCTAGCAAAATAAGCTTATCTGGAGGTGTTTTGGAAGAAAAGATTGCTAATGCTTCTATTTTTTCTGATCACCACCATTCTTGTGCTGCTGCAGATTTACCTCCTTCTGGTGTTATGAAGATTGAAGGAAACCCTTGTTACATTCACCCATACATCCATAAAAAGTTATCGCAGATTCATGGTGGGGTGCTTTCAAAGGATGTTTTATGTCAAAGGGAGGAACAAAATTTTTATTTGGATGATTGCTTAGGGGCTAGTAGTGGCTCTAGTTACCAAAATCCAGAAGTAACTTCCAGTGACATTTGTAAGGCTGATAAAGTAAATACGAAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCAAAAGATGAAGTGGATGGTGAACTGATATATTTTCAGCATAGGTTATTGCAAAATTCAGTTGCAAGGAAGAAGTTTGCTGACAACTTAATCTCTAGTATAGTTAAGAGTCTTCCGCAGGAGATTGATGCAACACACCAGCAAAGATGGGATGCTGTACTTGTTAACCAGTACCTCCGTGATCTTAGGGAAGCAAAAAAGCAGGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAGGCAGTGTTGGCTGCTGCAACTGCTGCTGCAGCATCATCATCTAGGGTTTCTTCCTTGCGGAAGGATGCCTTTGAAGAACCTGTACAACCAGAGAATTTGTTAAAGCACACTTTCAGTGGAAGGACTGGGGTTTGCTCTCTGCCAATGCCGCGGGCCAAAGAAACACCCTCAAGAGTAGCTATGGTTAGGATATCATCAGAGAAACATTCAGATTTTGGCATTGGAAATGCAGATTTTTCTAAGGAGCATCCCAAATTATGTGATATCTGTAGACGATCTGAAACTATATTGAACCCAATACTCGTCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGTAGTGTGAAGGAATTCACAGGTCCATGGTACTGTGAATTATGTGAAGATTTATCATTTAGAATATCTGGACAGCCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGCGGCGGTACTACTGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGATTTTTGAGTCTACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTGTGTTGAAAGGAGTAGACACTTGTTGCATCTGTCACCGCAAGCATGGTGTATGCTTAAAGTGTAGCTATGGCCATTGTCAGACCACATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCCAGCGGTAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTCAGAACAGAGGGCAAAGGCTGAAAGCCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAAGCAAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAGAAGATAAAGCGGGAATTGGTTCTATGTTCACATGACATACTAGCCTTCAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTGCATAGCCCTTTCATACTTCCTGATTGTAGTTCAGAATCAGCTACAACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCAGATGATGTAACTGTGGACAGCTCGGTTTCTGCCAAGCATCGAGTACGAGTTGCTGTTACCATGGACAGTGATCCAAAGTTGGATGACGACTGCTCAACTTCGCAAAGCCATTATAATAATAAGATTCCTGAGAGGGCGCAGTTTTCTGGCAAGCAGATTCCTCATAGAGCTTCCATCATATCACGGAATCTTTCGGATGACAGCGGATGGAGATCAAAATCAAGAAAGCATCAAGAGGCATTTGGAAAAGAGCTGGTTATGACGTCAGACGAAGCATCGATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCCTGTCTAATGATAAGCGATCCAAGCAGGATGTATTTACTAGCGAACCAGCGGAGCACAATGGGTGA 4263 0.4328 MTGGQCHRRKKMKCRVAEGGCGTEDMPCPVSRVPVKSLGTQPGNSDNSLALDIDYYSQAIKTLSERSPFDVAEDTSTSTVPTLPSGCASFLNRHSESRRRHKKSHSGADKKSSRTSEKSRSSSFWVETEDYFRDLKLPDIDTLLEASSPFSLAARNCFSIPPVGNDTKSNVASYEDDKETDGNLNSEDVKNEDRVMKSNSVVAGGLAQVNKGHDTFDSSSSLEWLLGCRNKSSLISEPPSKRRKLLGGEAGLEKFFMAGPCDGDSPLCHYCCRGDTGRESNKLIVCVICKVAVHKKCYGVQDDVDESWLCSWCKQKDCVDEMVHPCVLCPKKGGALKPVHRHAESVGSVQFAHLFCCLWMPEIYIEDLKKMEPVMNVGGVHETRKKLVCDICKVKFGACIHCCHGSCRSSFHPLCAREASYSMEVWAKNDHDNIELRVFCSKHSDVQENSTIFCSDLSSADSLLGETQCILKTGCQNGDNIGIFSDGSPDKLSHSESQDGMLSDCLLNAHKTSECSGFPQLSNTAVVGRTDEIANASDSLSFALVLKKLIDRGKVDLKNVALEIGISSETLSANINDPCMAPDVQLKIVNWLKAHVYTNASQRSLKVKFKPANSSKAENGITDGSDTLQISNSELPDPVAVKSVPSRRRTTGNIRILKDNKVICSSGMASSENEMPMDKVKGGQSEHENSEISNEASIPDAAEMELTKSEYACFDSQGNADEPSKISLSGGVLEEKIANASIFSDHHHSCAAADLPPSGVMKIEGNPCYIHPYIHKKLSQIHGGVLSKDVLCQREEQNFYLDDCLGASSGSSYQNPEVTSSDICKADKVNTKQLVMARNMGLLESCPKDEVDGELIYFQHRLLQNSVARKKFADNLISSIVKSLPQEIDATHQQRWDAVLVNQYLRDLREAKKQGRKERRHKEAQAVLAAATAAAASSSRVSSLRKDAFEEPVQPENLLKHTFSGRTGVCSLPMPRAKETPSRVAMVRISSEKHSDFGIGNADFSKEHPKLCDICRRSETILNPILVCSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSFRISGQPSINSWEKPYFVAECGICGGTTGAYRKSSDGHWVHAFCAEWIFESTFRRGQVNAVEGMETVLKGVDTCCICHRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAASGKLQHRAYCEKHGSEQRAKAESQKHGIEELKSIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVHSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKHRVRVAVTMDSDPKLDDDCSTSQSHYNNKIPERAQFSGKQIPHRASIISRNLSDDSGWRSKSRKHQEAFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRSKQDVFTSEPAEHNG 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00416 1420 Pfam PHD-zinc-finger like domain 325 443 - -
Accr4g00416 1420 Pfam PHD-zinc-finger like domain 1079 1185 - -
Accr4g00416 1420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 990 1061 IPR013083 -
Accr4g00416 1420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 322 IPR013083 -
Accr4g00416 1420 MobiDBLite consensus disorder prediction 668 696 - -
Accr4g00416 1420 MobiDBLite consensus disorder prediction 67 92 - -
Accr4g00416 1420 ProSitePatterns Zinc finger PHD-type signature. 1012 1055 IPR019786 -
Accr4g00416 1420 ProSiteProfiles Extended PHD (ePHD) domain profile. 1077 1186 IPR034732 -
Accr4g00416 1420 Pfam PHD-finger 1023 1056 - -
Accr4g00416 1420 Pfam PHD-finger 281 314 - -
Accr4g00416 1420 Coils Coil 1206 1226 - -
Accr4g00416 1420 ProSiteProfiles Zinc finger PHD-type profile. 265 316 IPR019787 -
Accr4g00416 1420 SUPERFAMILY FYVE/PHD zinc finger 999 1056 IPR011011 -
Accr4g00416 1420 SMART PHD_3 388 444 IPR001965 -
Accr4g00416 1420 SMART PHD_3 1011 1056 IPR001965 -
Accr4g00416 1420 SMART PHD_3 267 314 IPR001965 -
Accr4g00416 1420 SMART PHD_3 1132 1186 IPR001965 -
Accr4g00416 1420 ProSiteProfiles Extended PHD (ePHD) domain profile. 323 444 IPR034732 -
Accr4g00416 1420 MobiDBLite consensus disorder prediction 67 120 - -
Accr4g00416 1420 CDD ePHD 1080 1185 - -
Accr4g00416 1420 PANTHER PHD FINGER PROTEINS 76 948 - -
Accr4g00416 1420 SUPERFAMILY FYVE/PHD zinc finger 259 315 IPR011011 -
Accr4g00416 1420 ProSitePatterns Zinc finger PHD-type signature. 268 313 IPR019786 -
Accr4g00416 1420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 446 IPR013083 -
Accr4g00416 1420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1077 1188 IPR013083 -
Accr4g00416 1420 Coils Coil 905 925 - -
Accr4g00416 1420 ProSiteProfiles Zinc finger PHD-type profile. 1009 1058 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00416 Accr-Chr4 4011538 4022595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00416 262 448 C2H2 Transcription Factor Family AT3G14740 30.526 4.90e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr4g00416 zf-HC5HC2H_2 1.8e-21 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00416 - - gmx:100775631 1716.05