Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00412 ATGCATCGCCTACCTCGATTTTTCGGCCATAGCAAGCGAGCCGAGGGCATGGACCAGAAGATCCGAAGAAAACCGAAGCTCGAGCGCCGTAATGCCGCTAAATTCTTTGAGTATGATGCTGCGTCATCTTCGTCGTCGCTGGACGACTCCTGTGGCTCTCTATATACTCGATCAATGGATTGTTACGACCGAACCAGCTTCCGAATTGAGGGAGTTGATGGCGAGTTTGATCTAATATGCAGGAGTTTGGGGCTATCCGGACCAGAAGACTTCGCTATCCCGCCGGCGGCGTGGGAGGCTATGAGGGTTAGGTCGTCTTCGGATATTCTTCCAAGGTTGAAGTTGAACGAGTTGGAAAGTCAGGAGAAGGAGGAGTTAAAAAATGAAGAGTCGAATCAATTAGTGCGTGAAGCAGATGACAAATGTGAAGAAAGGGTTACAATTAGGGATGTGACTGAATCAGCTAAAGACGAACCTGCTGAGACTAGTGGCAGCGGAGGTATCAAGGGCGAGTTTGATCTAATATGCAGGAGTTTGGGGCTATCCGGACCAGAAGACTTCGCAATCCCGCCGGCGGCATGGGAGGCTAGGAAGGTTAGGTCGTCTTCGGATATTCTTCCAAGGTTGAAGTTGAGCGAGTTGGAAAGTCAGGAGAAGGAGGAGTTAAAAAATGAGGAGTCGAATCAATTAGTGCGTGAAGCAGATGACAAATGTGAAGAAAGGGTTACAATTAGGGATGTGACTGAATCAGCTAAAAACGAACCTGCTGAGATTAGTGGCAGCGGAGGTATCAAGGGTCTCCGTCCGCGGATGATTAAGCCACCGCCAGGGATGAGACTTCCAGTTATTGATAACATGTGTTCTACCTGGGATCTTCTGAGAGATTTTGCTCCTCAAGGCGAAAGACAGTCATTGGAAAAGTATGAGGAGCCGAACTTTTCTGATGATGCCCAAGAACGACACAGAGAAACGGGGAGAGCAGAAGAGCAAAAACAAGAAGAAGCAGGAGAACATGGGGTGGATGGGTTTACTCCGAAGTTAGAAGAGGATAATGCATCGAGGCTGGCGAATGCGGTTGCAGAGTTTTCGGGATGTTCGTTTACCACATCAAACGAAGATGATTCTTCGAGCTCATCCACCGGTCCTAGGTCTACCAATATATCTCCTAATGTAAGATTTAGACGAATTATCGCGAACTGGCAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTGTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAAGTTTCACTGCTTGATCCAGGGAGTCAGGGACAGCAAAGCGTCTTTCAACTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAACATTGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTACATCTTTCTCGAGCTTGTTACTAAAGGCTCCCTTGCAAGCCTCTACAGGAGGTACAATCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGATCAAAATGTGATTCACAGGGATATCAAATGTGCCAATATATTGGTGGATGCAAGCGGATCTGTCAAGCTAGCGGATTTCGGATTGGCAAAGGCAACCAAATTAAACGATATTAAATCATGCAAGGGGACAGCATTTTGGATGGCGCCTGAGGTTGTAAAAGGCAAGAATCAAGGTTACGGGCTTCCAGCTGATATATGGAGTCTTGGCTGCACTGTATTGGAGATGTTAACCGGCCAAATTCCATACTCTAATCTGGAAGGGATGCAAGCATTGTATAGAATTGGAAAAGGTGAACGCCCGCCTGTTCCTGAATCTCTTTCAAAGGATGCAAGGGCTTTTATACTGCAGTGTCTTCAAGTCAATCCAGACGATCGTCCCACTGCTACTAAGCTGTTAAACCATCCATTTGTCCAAAGGCCACTTTCCATTTCGTCTGGCTCTGCATCCCCTTATATTCCCGGCAGAAGGAATCAACTAGTCAGCTCCAACTAA 2040 0.4662 MHRLPRFFGHSKRAEGMDQKIRRKPKLERRNAAKFFEYDAASSSSSLDDSCGSLYTRSMDCYDRTSFRIEGVDGEFDLICRSLGLSGPEDFAIPPAAWEAMRVRSSSDILPRLKLNELESQEKEELKNEESNQLVREADDKCEERVTIRDVTESAKDEPAETSGSGGIKGEFDLICRSLGLSGPEDFAIPPAAWEARKVRSSSDILPRLKLSELESQEKEELKNEESNQLVREADDKCEERVTIRDVTESAKNEPAEISGSGGIKGLRPRMIKPPPGMRLPVIDNMCSTWDLLRDFAPQGERQSLEKYEEPNFSDDAQERHRETGRAEEQKQEEAGEHGVDGFTPKLEEDNASRLANAVAEFSGCSFTTSNEDDSSSSSTGPRSTNISPNVRFRRIIANWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDPGSQGQQSVFQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDASGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSNLEGMQALYRIGKGERPPVPESLSKDARAFILQCLQVNPDDRPTATKLLNHPFVQRPLSISSGSASPYIPGRRNQLVSSN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00412 679 Coils Coil 112 132 - -
Accr4g00412 679 ProSiteProfiles Protein kinase domain profile. 400 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00412 679 Pfam Protein kinase domain 401 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00412 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Accr4g00412 679 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 140 666 - -
Accr4g00412 679 SUPERFAMILY Protein kinase-like (PK-like) 374 659 IPR011009 -
Accr4g00412 679 Gene3D Transferase(Phosphotransferase) domain 1 398 666 - -
Accr4g00412 679 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Accr4g00412 679 FunFam Mitogen-activated protein kinase 1, putative, expressed 398 665 - -
Accr4g00412 679 SMART serkin_6 400 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00412 679 MobiDBLite consensus disorder prediction 148 167 - -
Accr4g00412 679 MobiDBLite consensus disorder prediction 121 141 - -
Accr4g00412 679 MobiDBLite consensus disorder prediction 366 387 - -
Accr4g00412 679 MobiDBLite consensus disorder prediction 304 346 - -
Accr4g00412 679 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00412 Accr-Chr4 3945573 3952248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00412 1 657 MAP Kinase Kinase Kinase AT4G08500 48.126 1.78e-174 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr4g00412 Pkinase 3.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00412 K13414 - gmx:100819177 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00355 3 3861016 3873819 Accr4g00412 4 3945573 3952248 CCT
Accr4g00412 4 3945573 3952248 Accr4g00412 4 3945573 3952248 ECH