Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00411 ATGCATCGCCTACCTCGATTTTTCGGCCATAGCAAGCGAGCCGAGGGCATGGACCAGAAGATCCGAAGAAAACCGAAGCTCGAGCGCCGTAATGCCGCTAAATTCTTTGAGTATGATGCTGCGTCATCTTCGTCGTCGCTGGACGACTCCTGTGGCTCTCTATATACTCGATCAATGGATTGTTACGACCGAACCAGCTTCCGAATTGAGGGAGTTGATGGCGAGTTTGATCTAATATGCAGGAGTTTGGGGCTATCCGGACCAGAAGACTTCGCTATCCCGCCGGCGGCGTGGGAGGCTATGAGGGTTAGGTCGTCTTCGGATATTCTTCCAAGGTTGAAGTTGAGCGAGTTGGAAAGTCAGGAGAAGGAGGAGTTAAAAAATGAGGAGTCGAATCAATTAGTGCGTGAAGCAGATGACAAATGTGAAGAAAGGGTTACAATTAGGGATGTGACTGAATCAGCTAAAAACGAACCTGCTGAGATTAGTGGCAGCGGAGGTATCAAGGGTCTCCGTCCGCGGATGATTAAGCCACCGCCAGGGATGAGACTTCCAGTTATTGATAACATGTGTTCTACCTGGGATCTTCTGAGAGATTTTGCTCCTCAAGGCGAAAGACAGTCATTGGAAAAGTATGAGGAGCCGAACTTTTCTGATGATGCCCAAGAACGACACAGAGAAACGGGGAGAGCAGAAGAGCAAAAACAAGAAGAAGCAGGAGAACATGGGGTGGATGGGTTTACTCCGAAGTTAGAAGAGGATAATGCATCGAGGCTGGCGAATGCGGTTGCAGAGTTTTCGGGATGTTCGTTTACCACATCAAACGAAGATGATTCTTCGAGCTCATCCACCGGTCCTAGGTCTACCAATATATCTCCTAATGTAAGATTTAGACGAATTATCGCGAACTGGCAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTGTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAAGTTTCACTGCTTGATCCAGGGAGTCAGGGACAGCAAAGCGTCTTTCAACTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAACATTGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTACATCTTTCTCGAGCTTGTTACTAAAGGCTCCCTTGCAAGCCTCTACAGGAGGTACAATCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGATCAAAATGTGATTCACAGGGATATCAAATGTGCCAATATATTGGTGGATGCAAGCGGATCTGTCAAGCTAGCGGATTTCGGATTGGCAAAGGCAACCAAATTAAACGATATTAAATCATGCAAGGGGACAGCATTTTGGATGGCGCCTGAGGTTGTAAAAGGCAAGAATCAAGGTTACGGGCTTCCAGCTGATATATGGAGTCTTGGCTGCACTGTATTGGAGATGTTAACCGGCCAAATTCCATACTCTAATCTGGAAGGGATGCAAGCATTGTATAGAATTGGAAAAGGTGAACGCCCGCCTGTTCCTGAATCTCTTTCAAAGGATGCAAGGGCTTTTATACTGCAGTGTCTTCAAGTCAATCCAGACGATCGTCCCACTGCTACTAAGCTGTTAAACCATCCATTTGTCCAAAGGCCACTTTCCATTTCGTCTGGCTCTGCATCCCCTTATATTCCCGGCAGAAGGAATCAACTAGTCAGCTCCAACTAA 1752 0.4646 MHRLPRFFGHSKRAEGMDQKIRRKPKLERRNAAKFFEYDAASSSSSLDDSCGSLYTRSMDCYDRTSFRIEGVDGEFDLICRSLGLSGPEDFAIPPAAWEAMRVRSSSDILPRLKLSELESQEKEELKNEESNQLVREADDKCEERVTIRDVTESAKNEPAEISGSGGIKGLRPRMIKPPPGMRLPVIDNMCSTWDLLRDFAPQGERQSLEKYEEPNFSDDAQERHRETGRAEEQKQEEAGEHGVDGFTPKLEEDNASRLANAVAEFSGCSFTTSNEDDSSSSSTGPRSTNISPNVRFRRIIANWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDPGSQGQQSVFQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDASGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSNLEGMQALYRIGKGERPPVPESLSKDARAFILQCLQVNPDDRPTATKLLNHPFVQRPLSISSGSASPYIPGRRNQLVSSN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00411 583 FunFam Mitogen-activated protein kinase 1, putative, expressed 302 569 - -
Accr4g00411 583 Pfam Protein kinase domain 305 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00411 583 SMART serkin_6 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00411 583 Gene3D Transferase(Phosphotransferase) domain 1 302 570 - -
Accr4g00411 583 SUPERFAMILY Protein kinase-like (PK-like) 278 563 IPR011009 -
Accr4g00411 583 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Accr4g00411 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 570 - -
Accr4g00411 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Accr4g00411 583 MobiDBLite consensus disorder prediction 270 291 - -
Accr4g00411 583 MobiDBLite consensus disorder prediction 208 250 - -
Accr4g00411 583 ProSiteProfiles Protein kinase domain profile. 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00411 583 MobiDBLite consensus disorder prediction 153 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00411 Accr-Chr4 3945573 3952248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00411 1 561 MAP Kinase Kinase Kinase AT4G08500 50.081 9.68e-175 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr4g00411 Pkinase 2.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00411 K13414 - qsa:O6P43_019713 744.962