Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00391 ATGGGTATCGACTCCCTCCATGAACTTGATTTCTCTGGCTCCAACACCACCACCCCCCCTGCCGACGACGATGACTACGCCGCTTCTTGCCAATGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGCCCCCAAGACGACTTCCACGGCCTCATAGAGTCTATGCTGGATGACTCTGCCGCAATCCTCAGCTCCCACCAACACGGCACGGAAGAAGGCTACAACTCCGCCTACTCCACGTCCACGGAAGCAACTGTGCTGGACGAGGAAGTGACGGACAGTGTTGAGGATTTCAAGGGTCTCAGGCTGGTGCACCTTCTGATGGCAGCCGCCGAAGCCCTCTCCGGCGCCAATAAGAGCCATGATCTGGCTCGCGTGATATTGATTCGGCTCAACGAGTTGGTTTCCCCCACCGACGGCTCCAACATGGAGAGGCTGGCGGCGTATTTTACGGAAGCCTTGCAGGGTTTGCTCGAAGGCCCACAGAATAACAACCACCACAACAAACATTTCATCGGCAGCGGACCCCACCGCGAGGACCACCCTCCACTGGATATGCTGGCTGCCTTCCAGCTCCTTCAGGACATGTCTCCCTACGTCAAGTTCGGCCACTTCACCGCAAATCAGGCCATCCTGGAGGCCGTGGCCACCGAGCGGCGAGTCCACATCATCGACTACGACATCATGGAAGGCATCCAGTGGGCGTCCTTCATTCAGGCTCTCGCTTCCAAAACGGACGGGCTACCCGGGCCACACCTCAGGATCACCGCCTTGTCGAGAAGCGGAGGCGGAAGAAGATCCATCGCCACCGTGCAAGAGACGGGGCGTCGTTTGACGGCGTTCGCGGCTTCCGTGGGCCAACCGTTCTCGTTTCATCAATGCAGGCTGGACCCGGACGAGACGTTTCGACCGTCTGGTCTGAAGCTGGTTCGAGGAGAGGCCCTGGTGTTCAACTGCATGCTTCATCTCCCCCATCTCACTCACCGGGCACCCGAATCGGTGGCATCGTTCCTAAACGGAGCAAAGACGTTGAATCCGAGACTAGTGACAATGGTAGAGGAGGAGAAGGGGGTGAGCGGAGACGGAGGGTTTGTGAGTCAGTTCATGGAGTGTTTGCACCATTACTCGGCGGTGTACGATTCGGTGGAGGCGGGGATACCCATGCAAAGCGGGGCGAGGACGTTGGTGGAGCGGGTGTATTTGGGGCCCCGAATAGCCGGGTCGGTGGCCAGGATATACAGAAACGGGGGTGAAGAGGGAAGAGAGTCTTGGGGGGACTGGTTGGGTGAGGCGGGGTACAAGGGAGTGACCATAAGCTTCGCGAACCAATGCCAAGCCAATCTCTTGTTGGGACTGTTCAACGACGGGTTTAAGGCAGAGGTGTTGGGTTGCAATAAGTTGGTGTTGAGTTGGAGATCCAGGCGTTTGCTCTCTGCCTCTCTTTGGACGTCTTCTTCTCCAATCCCTCCTCCTCAGATATTAATATATTAA 1500 0.5753 MGIDSLHELDFSGSNTTTPPADDDDYAASCQWNHWSPLVNWDAFTGPQDDFHGLIESMLDDSAAILSSHQHGTEEGYNSAYSTSTEATVLDEEVTDSVEDFKGLRLVHLLMAAAEALSGANKSHDLARVILIRLNELVSPTDGSNMERLAAYFTEALQGLLEGPQNNNHHNKHFIGSGPHREDHPPLDMLAAFQLLQDMSPYVKFGHFTANQAILEAVATERRVHIIDYDIMEGIQWASFIQALASKTDGLPGPHLRITALSRSGGGRRSIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETFRPSGLKLVRGEALVFNCMLHLPHLTHRAPESVASFLNGAKTLNPRLVTMVEEEKGVSGDGGFVSQFMECLHHYSAVYDSVEAGIPMQSGARTLVERVYLGPRIAGSVARIYRNGGEEGRESWGDWLGEAGYKGVTISFANQCQANLLLGLFNDGFKAEVLGCNKLVLSWRSRRLLSASLWTSSSPIPPPQILIY 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00391 499 ProSiteProfiles GRAS family profile. 97 486 IPR005202 -
Accr4g00391 499 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 481 IPR005202 -
Accr4g00391 499 Pfam GRAS domain family 106 486 IPR005202 -
Accr4g00391 499 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00391 Accr-Chr4 3719702 3721201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00391 103 487 GRAS Transcription Factor Family AT5G41920 33.760 2.26e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr4g00391 GRAS 3.7e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00391 - - cit:102620887 649.047