Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00386 ATGGTAAAGAGAGGGCTCAAGATCAACCCAGAGACATCATCAAAGGCAATGCAAGGTCCGTCATCATCAGATGGGAAAAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGTTCATGGGTTTCTGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTGGGATCTTATTCAACCCCTGAGGCTGCAGCTCGAGCCTACGATGCTGCACTTTTATGTCTTAAAGGTTCTTCAGCTAATCTTAACTTCCCTTCAAGTTATTCGCACTATATTCCTCAAGACACAGCCATGTCTCCTAAATCAATCCAAAGAGTTGCTGCTGCTGCTGCTAATAGTTTTGCTGATGAAAACGCCACAACCCCTGCCTCTGCCTCAACCTCGTCGTCCTCACTTGTCTCCTCCCCGTCAATGTCTTTCTCCGATCAAATCGACGATGATGTCTCACTAATCTCGTCATTTGGTGGGGCCTACACTAGTTGTGATCAAACAAATGAGCCACTCTCTTTGATGGACTCTTATTGGTACAGCTTTGATGATTTACAATCTCCGAAGTATGTGAATCAAATGCTCGGTGGTAATTTGTTTGATATTGATCCGACCCAGCCGCTGGATGATTTTTGCGAAGAAAGCGATATTCGTTTGTGGAGCTTCTGCTGA 660 0.447 MVKRGLKINPETSSKAMQGPSSSDGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSYSHYIPQDTAMSPKSIQRVAAAAANSFADENATTPASASTSSSSLVSSPSMSFSDQIDDDVSLISSFGGAYTSCDQTNEPLSLMDSYWYSFDDLQSPKYVNQMLGGNLFDIDPTQPLDDFCEESDIRLWSFC 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00386 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 152 - -
Accr4g00386 219 FunFam ethylene-responsive transcription factor ERF014-like 27 87 - -
Accr4g00386 219 CDD AP2 27 87 IPR001471 GO:0003700|GO:0006355
Accr4g00386 219 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Accr4g00386 219 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Accr4g00386 219 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Accr4g00386 219 SUPERFAMILY DNA-binding domain 28 87 IPR016177 GO:0003677
Accr4g00386 219 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Accr4g00386 219 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Accr4g00386 219 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Accr4g00386 219 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00386 Accr-Chr4 3687817 3688476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00386 29 218 AP2-EREBP Transcription Factor Family AT1G21910 52.657 5.06e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g00386 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00386 - - qsa:O6P43_015204 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00386 4 3687817 3688476 Accr4g00386 4 3687817 3688476 ECH