Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00356 ATGTCGTCTAATGAGTCAAAGAAAGTGTTCGATGAAGGAGCAGCGCTTTTGCTCGTGGATGAGCTGAGGGGCATATTCGCTTCTGGCACGACGCGAAGTTACGAGTGGAGAGTTTCGCAGTTGAAGGCCCTTTCTAAGTTGGTCGATGATCGTGAGCAACAGATTATCGAAGCTCTTCGCTCCGATCTCTGCAAGCCCCCACTTGAAACCGTCGCCTACGAGATTGCTATGCTGAAAAATTCATGTAGAGTTGCATTGAAAGAACTGAAACATTGGATGAAGCCAGAAAAGGTCAAAACTTCAATGACCACTTTTCCTTCTTCAGCAGAAATAGTGTCTGAACCTTTGGGGGTTGTGTTAATCATCTCGGCATGGAATTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATACGGTGGTGCTTAAACCATCAGAAATTGCTCCGGCCACATCATCGCTGCTGGCAAAATTGTTAGAGGAGTACATGGATAACTCATCTATAAAGGTTGTTGAGGGGGCAGTTGATGAAACATCTGCTCTGCTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATAGTAATGGCTGCTGCTGCAAAACACCTTACGCCAGTTGTTCTGGAGCTTGGAGGGAAATCTCCAGTTGTTGTTGATTCAGATATCAATTTACGAGTAGCAGCTAGACGGATAATTGCAGGCAAGTGGGGTTGCAACAATGGACAAGCCTGCATTTCTCCAGATTATATTCTAACAACAAAAGACTTTGCCCCTAAGCTGATTGATGCCCTGAAGACTGAATTGGGGAAATTTTATGGAGAAAACCCATTAGAATCAAAGGATTTGTCACGCATTGTGAATATGAATCACTTTGCTCGCCTGAGAAAGCTATTGGAGGATGATAAGGTCGCTGGTAAGATTGTTTATGGAGGAGAAAAGGATGAAAGCAAATTGAGGATTGCTCCCACTATTTTATTGGATGCTCCTAGAAATTCTCTGATAATGAAGGAGGAGATATTTGGTCCTTTACTTCCCATTATCACGGTCAATAAATTGGAAGAAAGTTTCGATGTGATTAATTCAGGAACAAAACCCCTCGCTGCATATTTATTTACCAACAATAAGAAGCTCAGGGAGCAGTTTGTGACGACCGTATCTGCAGGGGGTTTGGTTGTCAATGACACTACCGTACATCTCGCCACCCATACTTTGCCATTTGGAGGAGTTGGGGATAGTGGAATGGGTTCATACCATGGGAAATTCTCGTTTGAAGCCTTTAGCCACAAAAAAGCAGTTTTGTATCGTGGCTTCAAGGCAGATGCATCAGTGAGGTACCCTCCGTACACAAAGACAAAGCTCAGATTGCTCAAGGCTTTGATCGGCGGTAGTATACTCGGTATAATCCGTGCCATTTTTGGATGGTCTTAG 1464 0.4365 MSSNESKKVFDEGAALLLVDELRGIFASGTTRSYEWRVSQLKALSKLVDDREQQIIEALRSDLCKPPLETVAYEIAMLKNSCRVALKELKHWMKPEKVKTSMTTFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNTVVLKPSEIAPATSSLLAKLLEEYMDNSSIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSDINLRVAARRIIAGKWGCNNGQACISPDYILTTKDFAPKLIDALKTELGKFYGENPLESKDLSRIVNMNHFARLRKLLEDDKVAGKIVYGGEKDESKLRIAPTILLDAPRNSLIMKEEIFGPLLPIITVNKLEESFDVINSGTKPLAAYLFTNNKKLREQFVTTVSAGGLVVNDTTVHLATHTLPFGGVGDSGMGSYHGKFSFEAFSHKKAVLYRGFKADASVRYPPYTKTKLRLLKALIGGSILGIIRAIFGWS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00356 487 PIRSF ALDH 2 481 IPR012394 GO:0006081
Accr4g00356 487 SUPERFAMILY ALDH-like 19 459 IPR016161 GO:0016491
Accr4g00356 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Accr4g00356 487 FunFam Aldehyde dehydrogenase 23 227 - -
Accr4g00356 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 442 IPR016162 GO:0016491
Accr4g00356 487 CDD ALDH_F3FHI 15 446 - -
Accr4g00356 487 PANTHER ALDEHYDE DEHYDROGENASE 18 477 IPR012394 GO:0006081
Accr4g00356 487 Pfam Aldehyde dehydrogenase family 35 444 IPR015590 GO:0016491
Accr4g00356 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Accr4g00356 487 FunFam Aldehyde dehydrogenase 224 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00356 Accr-Chr4 3472274 3476902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00356 75 485 Aldehyde Dehydrogenase Gene Family AT1G44170 74.209 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00356 K00128 - gmx:100778722 813.142