Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00352 ATGGCCGCCGCATCATCATCATCATCGCCTGCGGAGCTTCACTTACCCCCTGGCTTCAGATTTCATCCCACCGACGACGAGCTCGTCACCCACTATCTCTGCCCTAAATGTGCCTCCCGCCCTATCTCCGTCCCCATCATTGCCGACATCGACCTTTACCGCTACGACCCTTGGGACCTCCCTGCTAAGGCTTTGTATGGACAGAAGGAGTGGTACTTCTTCTCGCCCCGTAACCGCAAATATCCCAACGGTTCCAGGCCCAACCGTGCCGCCGGCACTGGCTACTGGAAGGCCACCGGAGCTGATAAACCCATCGGCCATCCCAGACCGGCCGGGATTAAGAAGGCTCTGGTTTTCTACGCCGGGAAAGCGCCTAAAGGAGAGAAAACCAATTGGATCATGCACGAGTATCGTCTGGCCGACGTGGATCGCACTGCTCGCAAAAGCACCGCCTTAAAGCTGGATGATTGGGTGCTTTGCCGAATATACAACAAGAAGGGCATAATTGAGAAACAACCGACTGTGGGCGGCCGCAAAACTGAGTGGTCAGAAATGGAGGACATGAAGCCGGAAAATGTGCCAGAAGGTGTTGGTCTTCCCGGGCATCCTCCTCATGCTCCGGCGGCTGCTGCCATGACCGATTACTTGTACTTTGACAAGTCGGATTCAGTCCCGAAGCTGCACACAGAGTCGAGTTGCTCCGAACATGTGGTGTCGCCGGAGTTTGCGAGCGAGGTGCAGAGCGAATCCGAGTGGAATGAATGGGAAAAGAAGGCTGACTTTCCATATAATTACACGGCGGGGGCCACCATGAACAATGGTTTGGGGTCTCAGGCGACTCAGTTGGTGCAGAGCAATAATCAGATGTCGTCGTTGCAGGACATTTTCATGTACTTTCAACAGAAGCCCTACTGA 915 0.5443 MAAASSSSSPAELHLPPGFRFHPTDDELVTHYLCPKCASRPISVPIIADIDLYRYDPWDLPAKALYGQKEWYFFSPRNRKYPNGSRPNRAAGTGYWKATGADKPIGHPRPAGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRTARKSTALKLDDWVLCRIYNKKGIIEKQPTVGGRKTEWSEMEDMKPENVPEGVGLPGHPPHAPAAAAMTDYLYFDKSDSVPKLHTESSCSEHVVSPEFASEVQSESEWNEWEKKADFPYNYTAGATMNNGLGSQATQLVQSNNQMSSLQDIFMYFQQKPY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00352 304 ProSiteProfiles NAC domain profile. 15 165 IPR003441 GO:0003677|GO:0006355
Accr4g00352 304 Gene3D NAC domain 24 168 IPR036093 GO:0003677|GO:0006355
Accr4g00352 304 FunFam NAC transcription factor 24 169 - -
Accr4g00352 304 PANTHER NAC TRANSCRIPTION FACTOR 56 15 230 - -
Accr4g00352 304 Pfam No apical meristem (NAM) protein 16 139 IPR003441 GO:0003677|GO:0006355
Accr4g00352 304 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00352 Accr-Chr4 3440912 3442383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00352 13 304 NAC Transcription Factor Family AT1G01720 64.262 3.05e-129 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr4g00352 NAM 2.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00352 - - gmx:100805768 432.95