Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00348 ATGGAAAGCCAGCAGCAGCTTGGAGGTAGCAGCCGCATAGCAGCCGTGGACACTTCTCCTCCGGCTATCGAAAATGCAAACTCAAAGCAACAGGAACAACCCGGTTGGAAGAAGTTTTTGTCATTTATAGGTCCTGGTTTTCTGGTTTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAACCACGGATATGAGCTGCTGTGGGTGGTTCTCATTGGGCTCATCTTCGCCCTCATCATTCAGTCCTTGGCTGCAAATCTTGGCGTGAGCACTGGCAAGCACCTTTCGGAATTGTGTAAAGCAGAGTATCCATGTTTTGTCAAGTATTGCTTATGGATATTGGCTGAGCTTGCTGTTATAGCCGCAGACATCCCTGAAGTGATTGGCACCGCCTTTGCTCTTAACATACTCTTCCATATACCCTTATGGTGTGGAGTTCTATTGACGGGTTTGAGCACTCTCTTGCTTCTGGGTCTCCAAAGATTTGGGATAAGGAAGCTGGAATTGCTGATATCAACGATGGTGCTTATAATGGCGGCATGTTTCTTCGGAGAAATGAGCTACGTAAAGCCACCAGCTTCTGGCGTAATCAAAGGCATGTTTATCCCAAAACTCACCGGTCAAGGAGCCACCGGCGACGCCATTGCCCTTATCGGTGCTCTTGTCATGCCGCACAACCTTTTTCTCCACTCTGCTCTTGTCCTCTCTAGAAAAGTCCCCCATACCGTGCGTGGCATCAATGAGGCATGTAGATATTTCCTAATAGAAAGTGGGATTGCTCTGTTTATCGCGTTTCTAATCAACGTGGCAGTGGTCTCTGTTTCTGGCGCTGTTTGTTCTTCCCCCAACCTTTCCAGCGAAAACGCAGATAATTGCAGCAATCTAACTCTTGACTCTGCTTCTTTCCTTCTCAAGAATGTTCTGGGACGGTCCAGCTCAACCATTTATGCCATCGCACTTCTGGCCTCAGGCCAAAGCTCTGCTATCACAGGCACATATGCAGGGCAATTCATTATGCAGGGTTTCTTGGACTTGAAGATGAAAAAATGGACTAGGAACTTGTTGACTCGGACTGTTGCCATTACTCCTAGTCTTATTGTCTCCATTATTGGTGGATCATCTGGGGCAGGACGGCTTATCATCATCGCCTCGATGATACTTTCATTTGAGCTTCCATTCGCTATGATCCCACTCCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGTCCTCACAAGAATTCTATGATTATTATAATCATATCATGGATTCTGGGGGCAGGGATCATCGGAATCAATGTGTATTACCTGAGTACAGGGTTTGTGGGTTGGCTGATTCATAACAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATCATAGTGTTCCCATTGATGGCCATTTACATTGTAGCAGTCTTATACCTGACCCTAAGAAAGGACACTGTCGAGACTTATATTGAGACTAAGGACGACCCTACAGCACAGAACCACATGGAAAGAGGGCTCATGGATCCTAATAATGCCCAGGTGGAGTTGGGTCATGCTCCCCGCAGAGAGGATTTAGCTGACGTCCCTTTCCCCCAATAA 1608 0.4701 MESQQQLGGSSRIAAVDTSPPAIENANSKQQEQPGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPCFVKYCLWILAELAVIAADIPEVIGTAFALNILFHIPLWCGVLLTGLSTLLLLGLQRFGIRKLELLISTMVLIMAACFFGEMSYVKPPASGVIKGMFIPKLTGQGATGDAIALIGALVMPHNLFLHSALVLSRKVPHTVRGINEACRYFLIESGIALFIAFLINVAVVSVSGAVCSSPNLSSENADNCSNLTLDSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDLKMKKWTRNLLTRTVAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFAMIPLLKFSSSSTKMGPHKNSMIIIIISWILGAGIIGINVYYLSTGFVGWLIHNSLPKVANVFIGIIVFPLMAIYIVAVLYLTLRKDTVETYIETKDDPTAQNHMERGLMDPNNAQVELGHAPRREDLADVPFPQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00348 535 NCBIfam Nramp family divalent metal transporter 44 410 - -
Accr4g00348 535 Hamap Divalent metal cation transporter MntH [mntH]. 23 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 359 376 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 391 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 331 350 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 118 144 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 146 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 171 192 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PRINTS Natural resistance-associated macrophage protein signature 221 244 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 25 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 Pfam Natural resistance-associated macrophage protein 60 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Accr4g00348 535 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 37 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00348 Accr-Chr4 3409201 3412149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00348 18 535 Inorganic Solute Cotransporters AT1G15960 58.925 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00348 K21398 - gmx:100787785 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00348 4 3409201 3412149 Accr4g00348 4 3409201 3412149 ECH