Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00341 ATGGCTAGGCCATTATTCGTCTTCCTTTCCCTCCTCATCTCCCCTGTTGTCTCCACCATCTCGCTTGCTGCTTCACCTTCTTCTTCTTCTTCTTCATGCCCCTTCGATCTCACTTACGTCCTAACCTTCCCCTGGGACACTTCAACTTGCCTTCATGTTGACCCAAAAAATAATGGAACCCAACAATGTTGCCAAACCCTCCTCAGCCTCTTCGGAGTTGGCCTTGCTCAGCACCTCAAAGACACCTCTCTCTTCGAACTTCCCGATGTTAACACTTCCTCTTCTTGTCTCTCTGATTTCAGTACCAAGCTCTCAGATTTATCAATCCACGCCGATATGGTCTCTACTTGCTTCAACTCTACCCAGTTCGTTGCCAATAGCTCTAGCTGTGCAGGAATTAAGACGGCCCAGGATTTTGAATCAAAGGTTGGCACGATGACACCTTTAGATACATCTTGTAAAGGTGACCTCATGGGGCTAACTCGATGTGGTATTTGCCGTGATGCTGGCTTCAAGGTCACTTCCCAATTGACTAACATGGATCCAAAAAACTCCTCTGAATGTTTTTACTTCACTATCTTGTATGCTGCTGTTTTTGTTAATGAGTTTGGTCCTAAAGATGTTAGAACAGCTAGTTGCATACTTGGTATGCCTCTGTCCAGTTCTGGAACAAAAGGGTCGTCAAACAGAGACCGTACTCTGAAGTTGAGTTTTGGGTTATTGGGTGCGGTTACCGGTATTCTTCTTTCTTTTCTTTTTTTTGTTGTGTACAGGAAGTGGGATAGGAGAAGGAGGGAAAATATTCATCACAGAGAAGTAGTGAGCAGCGTGAGGGCCAACGTTTTACCTTACACTGGGGCCAAATGGTTTCACTTTTCAGAGCTTGAAAAAGCCACTGATAAATTTTCACAGAGGAATCTGATCGGTCAAGGATCTGATGGTGTTGTTTACAAAGGAACTCTTCAGGATGGCGCTTTGGTTGCAGTCAAAGAGATTTTTGATTTGGAATCCAAGGGGGATGATGAATTTTGCTATGAAGTAGAGATCATCAGCAAAATAAAGCACAGGAATCTTGTTGCGCTTCGAGGTTGTTGTGTCACAAGTGACAACTCCAAAGGTAAAAGGAGATTCTTGGTTTATGATTATATGCCGAATGGTAGCCTAAGCTACCAATTATCTCTTTCTGGACCTAATAGGCTAACATGGCCACAGAGAAAGAACATGATTGTTGATGTGGCTAAAGGGCTTGCTTATCTGCATTATGAAATAAAACCCCCAATTTATCACCGTGACATAAAGGCCACCAACATACTTTTAGACTCCACGATGAAAGCTAAAGTTGCAGATTTTGGATTAGCCAAGCAGGGCAATGAAGGCCAGTCTCATCTCACCACAAGAGTTGCTGGCACGTACGGTTATTTAGCACCAGAGTATGCTCTCTATGGGCAACTAACAGAGAAGAGTGATGTTTATAGCTTTGGAATTGTGATTCTTGAAATCATGAGTGGAAGAAAGGTGCTTGACACTTCAAACTCGTCGATTCTTTTGATCACAGACTGGGCTTGGACACATGCGAAGTCAGGTAAGATAGAGGAAATATTGGACGAGTCAATAAGAGAAGGAGGGCCAAAGAGGATAATGGAGAGGTTTGTTCTTGTTGGGATTCTCTGTGCTCATGTGATGGTGGCTTTGAGGCCTACCATTTCTGAGGCTCTCAAGATGCTTGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCGGTGCCTCTGGGTCACGAGTCCTTTCAATCCTCTCTTATGTATGGCTTTACAAGAAGTGGGAGATCTACACCGTTCGGTTCTTCTATTCAAGTGTGA 1860 0.4382 MARPLFVFLSLLISPVVSTISLAASPSSSSSSCPFDLTYVLTFPWDTSTCLHVDPKNNGTQQCCQTLLSLFGVGLAQHLKDTSLFELPDVNTSSSCLSDFSTKLSDLSIHADMVSTCFNSTQFVANSSSCAGIKTAQDFESKVGTMTPLDTSCKGDLMGLTRCGICRDAGFKVTSQLTNMDPKNSSECFYFTILYAAVFVNEFGPKDVRTASCILGMPLSSSGTKGSSNRDRTLKLSFGLLGAVTGILLSFLFFVVYRKWDRRRRENIHHREVVSSVRANVLPYTGAKWFHFSELEKATDKFSQRNLIGQGSDGVVYKGTLQDGALVAVKEIFDLESKGDDEFCYEVEIISKIKHRNLVALRGCCVTSDNSKGKRRFLVYDYMPNGSLSYQLSLSGPNRLTWPQRKNMIVDVAKGLAYLHYEIKPPIYHRDIKATNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTSNSSILLITDWAWTHAKSGKIEEILDESIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLMYGFTRSGRSTPFGSSIQV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00341 619 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00341 619 PANTHER OS01G0750732 PROTEIN 55 583 - -
Accr4g00341 619 SUPERFAMILY Protein kinase-like (PK-like) 286 593 IPR011009 -
Accr4g00341 619 ProSiteProfiles Protein kinase domain profile. 302 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00341 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Accr4g00341 619 Gene3D Transferase(Phosphotransferase) domain 1 383 581 - -
Accr4g00341 619 CDD STKc_IRAK 308 577 - -
Accr4g00341 619 FunFam Receptor-like serine/threonine-protein kinase At4g25390 267 382 - -
Accr4g00341 619 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Accr4g00341 619 Pfam Protein kinase domain 303 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00341 619 Pfam SPARK 28 189 IPR043891 -
Accr4g00341 619 Gene3D Phosphorylase Kinase; domain 1 263 382 - -
Accr4g00341 619 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 383 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00341 Accr-Chr4 3307243 3309102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00341 28 597 Receptor kinase-like Gene Family AT1G11050 53.846 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Accr4g00341 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00341 - - mtr:25482441 887.486