Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00330 ATGGGCTCGTGTGAGAGAATGGTAATGGCAAACGATGCGACACGCATGCCTATTATCACGAAGCATTGTTCAGAGTTTCCATTGCAATCTGTTCCCGTGGGGCAGTCCTGTTCAGAAGTAGGCTGCTCTGTGTTGGAGCCTAACATTGAGCTTTCCAATATTCTGGACAGTCGTAAATATTTCTCTACAAATGAAGAATCTGGCTCTGCAAACTGCATTGATGTTACCGACATGCCCAGCAATGCTAGAGCAAATCAATATGACAATGCTGATATGTTGCTGGTAGAGAAAAAATTGGACAATGATTGTCAGAACTGTTGCAGGACATTTTGTTGGCAATGTGAAGTTTATAACCTAGAAAATGGTAGCTTATGCACAGAAGAAAAAACTCACAATCATGATTGCTACCAGATTTTATCAGAGTTTAAATCTGTAAACGGTTTGCCAAAGAATATAGAGAGCAATAGAATCCCTTCTGCAGTGGACACTTTAGTGGCTTTGGAAGAAAAAAACAATGATTCTGGTTTACTCACTGATAATGGCAATCATATATTTGATTTCATTTATTCTGATTTTTCCTTGGAATCAGAACCTATACCTGGCTGTCTAGTCAATTTTCTCCAAAAGAGTGAGCAGGAGGACATTCTGAGAAATACAGATCTCTTGGAGGTTGAAGGCAACTGCAATACTTCTGGTGGGATGGAAGTAACTGCTTGCGAGCAGATATCTCCCGCACGGGGAAGTGAGTTGCCTTCTGATGCATTATATACAGATGCTTCATGTGGGATGAAAGTGGCTGTTTGCAACCAAACATATTTGCAAGCTAAGAGCTCTAGTGATCAGAAAGATGGTGGCGATTGCAACAGTCCTTATGAAGAATGGGTCAAAGACACTGTTGAGAAAAAGAGTATCACAGATGCATATGCACAAGTATTGTCCCCACCAACCTACCGGAGTACGTTGGGGAGTTCAATGTTGGCTTATTCAAGTGAGGCTACACAATTGGAACAGGAGACTGATAAGAATGACATTGATTCTTGTGAAGATGTTCCAAAATTTATGGAGCAAAATATTGATGGCATAAATGAAAGAAATGTTGAAATGAAGTACAATACATTGCAAATAGAAGGCAATTCCTCCAAATTGAAGGACAATTTGCAAGAAACTCCTACCTATTGTACCTTTTTTTCTGAATCAGGTCTGCCCTCCTTTGTTTCTTTACATGATAACCATTCAAAGGATGTGCCTGATCTCCTACTTAAGGACGATAGCTGTGCTATCAGTTATAATAACAGTTCGTGCAATTCTGAACAGAAAAAAGGAAAGCAAAATGTCAAAATTGATTGTGTCACTAAAAGCAAATGTTCAGACATTGTGTCATTGCCTCATCAAAGGAACAGTCGACAAAACAAATCTGTTTGTAAGCAACAGACTAGAAGGGCTCCAAGAAAATGCAATAAGCAAGCCAATGTGCCTCAACAGGAGAGGGGTGTGAAGACAATCTCAAAGACCTCTACAAAGAAAAGAAGCTGTTTCTCCAGAGCAGCCCGCTCTTCTGAGTGGGGATTGATAGGAAGCAGTAAACAGGTCAATGGCATGGATAGAGAGTTAAACACAAATAAAGTTATGCTTGAAGGATCGGGGAAGGCTAGGGGCAGATTTCAAAGTGGAAAAACAAATCAAGATAGTGAAAATTCTAACACATTCAATTCAATGTCTGGTGCTTCAACCTCTGGTATACGTCTGAAGATCAAAGTGGGGAAAGGGTGTAACTTATATTACCCAAACGTCCTGGTTCCAGAATCTGTTTATGGCTTGACTTCTGCTTCCAACTTGGGACCTGGTTCAGGTTCTCAAAATTTAGGTAGCAAAAATGTAGACAAATTATTTGAAGAAGTGGCTATGAGAAAGTCTGAATCTGATAAAACTAACCTTTACAAGCATGCTGTTGTTCTGAATGGGCAAATTGCCAACAACTTAGAAAGTGCTGCACTAATGAAGAAGTCAGATGGCGAAGCAGAGGAGCCTGGTCTTGTGGCTCCTTCAAATAAGTTGGTTGATGCATTGATAGAGCCTGTCAATATTAAGAGTTTGGATCCTGGAAGTGGAACTTCACCTGATTCAGAAGTGATTGATTCAATTCTTGATGTCCAGGTGGGAGAAAGGCATCAGGAAGATCTTAATAATACTGATTATGGTTTTAAGGAGTTTAATTTTTCTGTTCATAATACTGCTAGCAAGAGAAGGAAGAAGAAAGTTAAACCTATTCGTTCACGTAATGGTAGTGTAAGAGATGTATCAGCAGGTTCCCCAAGGAAAAATAAAGCAGATTACTCGGAGAATCTTGGAGGTAAGAAGAACTGCACTGATGTGGTTAGCTCTGTGGATTTGCCTAGTTCCACTGATATAATTACATTAAGCACAAGCAGTTCTGAAGACTCTGGAGTTCATACAGAACCATTGCACCTCTATGGAGATATTGGACTTAGAGATCCAACTGATTTGTTGGAAGTCAAAAGTAGTGTTGAGGTTGAGGCACGTTGCAGCCCAGATGTTAACAGTGAATATTCGGGCTTCCCTGGTTCTGAGAAATTTCTGCCTTCTGAGAGACATTTGGATTCTAATCTTCCCAAAAGTCTTAAATCTTATAATGTCAGCAAGACCAAGTCTAAAGCTTCCGAGTCAAAGAGTAGGAAAAAGACTGCTTGTAGGCATGGGGAGAAACTGGGGAGATCTGTCACCAAGTCTGGTGTTAAAGGAAATAGTGTGTCTGATAAAGTTATATGTGAAACAGAAGATTACCAACATGAAGAAAATGACACTGAAGAAATACACAAGTTGGATTTCGGTGGAAAAATTAATGCCAATGAGAACAAAGTATCAGCCAGTCAGGACATGGTACCTGGTGTTGGTTCGGGGGAGCAGCATCCATCACCACGAAAGGCATGGGTGTGTTGTGATGATTGCTACAAGTGGCGGCGTATTCCTGCTTCACTTGCTGACGTAATTGAAAAAACAAAGTGTGCCTGGACATGTAAGGATGGCGATGATAAAGCTTATGCCGATTGCTCTATCGCACAGGAAAAGTCAAACGCGGAGATCAATGCAGAGTTAGGATTATCATATGCATCTAGTGAAGAAGACAATAATGAAGATCGCAAAAACTATAAGGAGCCAGCACATCAACGTCCAATGTCTTCTCAGGAATCAACTTTTACTCATATTTCAGCCAATGAGTTTCTGCATCGTAGCCGCAAAACTCAGACTATAGATGAGATAATGGTTTGCCATTGCAAGCCACCTCTAAAAGGTCAGTTGGGATGTCGAAATGAATGTCTAAACCGGTTGCTTAACATTGAATGTGTTCAAGGGGCCTGCCCATGTGGGGATCTCTGTTCAAATCAGAAGTTCCAGAAACGCAATTATGCCAAACTGAAGTGGTTTAAATGTGGGAAAAAGGGCTATGGGCTGAAGGCGATTGAGGACATATCTGCAGGGCAATTCCTTATTGAATATGTTGGTGAGGTGCTTGATATGCATGCCTATGAGGCACGACAAAGTGAATATGCTTTGAAGGGTCGCAGACATTTCTATTTCATGACCTTGAATAGCAGTGAGGTGATTGATGCAAGTGCAAAAGGAAATCTGGGACGTTTCATTAATCATAGTTGTGATCCTAATTGTTGTACAGAAAAGTGGATGGTGAATGGAGAAATCTGTATTGGTCTGTTTGCATTGAGAGATATTAAGCAGGATGAAGAGGTGACATTTGACTACAACTATGTTAGGGTTTTTGGCGCTGCTGCAAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGTAGTGATTCACTCAATGCTGAAATCATTGTTCAAGATGATTCAGATGAAGAATTTCCAGAACCTGTGATGCTTACTGAAGGCGATATTGAAGACGGGCCAGGTGGTCACCCAGAGAAGGAGAATTCTCTAAACCCTGCTTCTGCCAGCTCTCAGCTGCACAGCCTGATAGAAGTGGAAAATTCTAAGGGCAATTTGTCATCTTTCATTCAAATGAAAGTACTTTCTCAGCAAATGGATGATGTAAGAAGAAAACCTACGCCTGCCTTACAACAAGGATCTGCAGTAGAATCTGAGCATTCTGACAAAACTTTGATTCCAAATATGGGGACTTCCTCTTCATCTGTTAGCAAATTCAAGTATAAAGTAATTGAAGACAGATGTGGTCTGTCAGAACCTCGTTTGCTTATGAAGGCTTCTCAAATAAATGGTTCTGTTAAAAAAGGGAAGGCGTGTGCTAACCCTACAAATAATCTCAAAGTTGGAGTGACCACTAACGGAATGCAGTTTCCATCCACCAAACATAAAAAGGCAGTGGGAGGTTTCTTCAATGGCCGTTTTGAAGCAGTTGAGGAGAAGCTTAAGAAGTTGCTAGATCCAGATGGAGGAATTAGCAAAAGTAAAGATGCCACCAAAGGCTACTTGAAGCTTCTGCTTCTTACTGCGGCATCAGGTGATAGGAGTAATGGTCAAGCCATTCAAAGCAATCGAGACCTTTCCATGATTCTTGGAGCCCTTTTGGAAACAAGATCAAAAGCTGTGCTGAATGATATAATTAAAAAAAATGGTTTACGCATGCTACACAACATAATGAAGCAATACAAGCGTGACTTTAAAAAAATTCCAATTTTGCGAAAGCTTCTTAAGGTCATAGAGCGCCTAGCAGAAAGAAAGATTTTGACATTTGAGCATGTTAATTGTGATCCCCCTTGTCGTGGAATGGAGAGCTTTAGGGAGTCAATGCTGTCCTTAACGGAACATGAAGACAAAGAGGTCCATCAGATTGCTCGAAGCTTTCGAGACAGATGGATTTCTAGATCTCTCAGAAAACGTGGCTTTATAAACAGGGATGACTGTGGGGTGAAATCATATAGGAGTTTCAAACGCAACAGATTTTCAACATCACCGAACAATACATGTGAACAGAGTTTGAGACCTACTAAAACAATAGATTGTGACCAGCCGTCATCGGTTGAAACAAGTTCAATCAATGCTGTTGCCCTGGAGGGCTGCTCTGCCCCATCTCTGAATGGGTGTGAAATCAGTGGGCAAATGAGACGTAAACGTAAAAGTCGATGGGATCAACCAGCAGAGACAAATTCAGTTGCAGTATCTCCTGAGCATAAGAAAGGAAAAGTTGTCTGTGGGCAGAATATTTCTGAAGATGTTGCACCTGGGTTTTCATGTTTATTCCAGCCTTCGGGTTCTTCAAATGCCTCGCAGAATTCTGGTGATCTTGCTTTGCAACCTCCGGACCATTCTGGTTCTGGATGTCCCTCTGATGCAGTTATAGGCAATCCAAGGGAAAAATTTAATCCTCGCTTGCCTGTCTCGTATGGAGTTCCATGGCCTGTTATCCAACAATATGGAACACCTCGGGTGGAAAAGGAAGGCTGTTGGGTCACTGCACCAGGCATGCCTTTCTATCCCTTTCCTCCACCACCCCCGTATCGACCCCCGAATGACTATGCTTCCAAGTCTACTGATGCTATGAAAATAGACCAGCCTGGAGAAATTGTGAGACCAGATTCTAGTGGTCTAGCTAATTGTTACTCGGATGATATGGCTCCCATGGCCAGCACAACTGGTCTTGGTGCTAAAGACCTTTCATATGAGGATAATAACCACAACTCTAAACCATTGAAGAGTTCCCCCGATGATCTGGGGAGGAGCTTCTTTAGGCAACAAAAATGGAATAAATCAAAAATACCTCGACCGTGGTCCAGGAGGAAATTCTGGGGACATGATGAGAGCAACTCTAGGGGTGGTTCGGGCAATTTATAG 5853 0.4147 MGSCERMVMANDATRMPIITKHCSEFPLQSVPVGQSCSEVGCSVLEPNIELSNILDSRKYFSTNEESGSANCIDVTDMPSNARANQYDNADMLLVEKKLDNDCQNCCRTFCWQCEVYNLENGSLCTEEKTHNHDCYQILSEFKSVNGLPKNIESNRIPSAVDTLVALEEKNNDSGLLTDNGNHIFDFIYSDFSLESEPIPGCLVNFLQKSEQEDILRNTDLLEVEGNCNTSGGMEVTACEQISPARGSELPSDALYTDASCGMKVAVCNQTYLQAKSSSDQKDGGDCNSPYEEWVKDTVEKKSITDAYAQVLSPPTYRSTLGSSMLAYSSEATQLEQETDKNDIDSCEDVPKFMEQNIDGINERNVEMKYNTLQIEGNSSKLKDNLQETPTYCTFFSESGLPSFVSLHDNHSKDVPDLLLKDDSCAISYNNSSCNSEQKKGKQNVKIDCVTKSKCSDIVSLPHQRNSRQNKSVCKQQTRRAPRKCNKQANVPQQERGVKTISKTSTKKRSCFSRAARSSEWGLIGSSKQVNGMDRELNTNKVMLEGSGKARGRFQSGKTNQDSENSNTFNSMSGASTSGIRLKIKVGKGCNLYYPNVLVPESVYGLTSASNLGPGSGSQNLGSKNVDKLFEEVAMRKSESDKTNLYKHAVVLNGQIANNLESAALMKKSDGEAEEPGLVAPSNKLVDALIEPVNIKSLDPGSGTSPDSEVIDSILDVQVGERHQEDLNNTDYGFKEFNFSVHNTASKRRKKKVKPIRSRNGSVRDVSAGSPRKNKADYSENLGGKKNCTDVVSSVDLPSSTDIITLSTSSSEDSGVHTEPLHLYGDIGLRDPTDLLEVKSSVEVEARCSPDVNSEYSGFPGSEKFLPSERHLDSNLPKSLKSYNVSKTKSKASESKSRKKTACRHGEKLGRSVTKSGVKGNSVSDKVICETEDYQHEENDTEEIHKLDFGGKINANENKVSASQDMVPGVGSGEQHPSPRKAWVCCDDCYKWRRIPASLADVIEKTKCAWTCKDGDDKAYADCSIAQEKSNAEINAELGLSYASSEEDNNEDRKNYKEPAHQRPMSSQESTFTHISANEFLHRSRKTQTIDEIMVCHCKPPLKGQLGCRNECLNRLLNIECVQGACPCGDLCSNQKFQKRNYAKLKWFKCGKKGYGLKAIEDISAGQFLIEYVGEVLDMHAYEARQSEYALKGRRHFYFMTLNSSEVIDASAKGNLGRFINHSCDPNCCTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPHCRGYIGSDSLNAEIIVQDDSDEEFPEPVMLTEGDIEDGPGGHPEKENSLNPASASSQLHSLIEVENSKGNLSSFIQMKVLSQQMDDVRRKPTPALQQGSAVESEHSDKTLIPNMGTSSSSVSKFKYKVIEDRCGLSEPRLLMKASQINGSVKKGKACANPTNNLKVGVTTNGMQFPSTKHKKAVGGFFNGRFEAVEEKLKKLLDPDGGISKSKDATKGYLKLLLLTAASGDRSNGQAIQSNRDLSMILGALLETRSKAVLNDIIKKNGLRMLHNIMKQYKRDFKKIPILRKLLKVIERLAERKILTFEHVNCDPPCRGMESFRESMLSLTEHEDKEVHQIARSFRDRWISRSLRKRGFINRDDCGVKSYRSFKRNRFSTSPNNTCEQSLRPTKTIDCDQPSSVETSSINAVALEGCSAPSLNGCEISGQMRRKRKSRWDQPAETNSVAVSPEHKKGKVVCGQNISEDVAPGFSCLFQPSGSSNASQNSGDLALQPPDHSGSGCPSDAVIGNPREKFNPRLPVSYGVPWPVIQQYGTPRVEKEGCWVTAPGMPFYPFPPPPPYRPPNDYASKSTDAMKIDQPGEIVRPDSSGLANCYSDDMAPMASTTGLGAKDLSYEDNNHNSKPLKSSPDDLGRSFFRQQKWNKSKIPRPWSRRKFWGHDESNSRGGSGNL 1950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00330 1950 SUPERFAMILY SET domain 1070 1281 IPR046341 -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1312 1333 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 553 575 - -
Accr4g00330 1950 Gene3D - 973 1034 - -
Accr4g00330 1950 SMART shorttest3 1091 1142 IPR006560 GO:0005634|GO:0042054
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1757 1783 - -
Accr4g00330 1950 ProSiteProfiles Post-SET domain profile. 1268 1284 IPR003616 -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1889 1950 - -
Accr4g00330 1950 ProSiteProfiles Zinc finger CW-type profile. 977 1031 IPR011124 GO:0008270
Accr4g00330 1950 MobiDBLite consensus disorder prediction 464 504 - -
Accr4g00330 1950 CDD SET_SETD2 1142 1284 IPR044437 GO:0010452|GO:0046975
Accr4g00330 1950 Pfam AWS domain 1105 1140 IPR006560 GO:0005634|GO:0042054
Accr4g00330 1950 ProSiteProfiles AWS domain profile. 1091 1141 IPR006560 GO:0005634|GO:0042054
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1757 1772 - -
Accr4g00330 1950 Pfam SET domain 1154 1260 IPR001214 GO:0005515
Accr4g00330 1950 MobiDBLite consensus disorder prediction 891 912 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 745 784 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1372 1393 - -
Accr4g00330 1950 Pfam CW-type Zinc Finger 983 1029 IPR011124 GO:0008270
Accr4g00330 1950 SMART set_7 1143 1266 IPR001214 GO:0005515
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1706 1730 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 483 504 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 868 919 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1374 1393 - -
Accr4g00330 1950 SMART PostSET_3 1268 1284 IPR003616 -
Accr4g00330 1950 FunFam Histone-lysine N-methyltransferase 1042 1298 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1046 1060 - -
Accr4g00330 1950 Gene3D SET domain 1035 1298 IPR046341 -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 1041 1069 - -
Accr4g00330 1950 MobiDBLite consensus disorder prediction 546 575 - -
Accr4g00330 1950 ProSiteProfiles SET domain profile. 1143 1260 IPR001214 GO:0005515
Accr4g00330 1950 PANTHER SET DOMAIN PROTEINS 503 1722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00330 Accr-Chr4 3181896 3193134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00330 1126 1283 C2H2 Transcription Factor Family AT2G23740 34.286 1.93e-20 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr4g00330 SET 2.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00330 - - pcin:129294371 2187.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00330 4 3181896 3193134 Accr4g00330 4 3181896 3193134 ECH