Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00329 ATGAAAATACTGCAAATGGGAGAGGCTGGAGAAGTCGACGGTGGAAGCTCCGATGGCCGGACGGTGGTGGTAGGAATGAAGCTGGACACGGCCAGCAAGGAGCTTCTCACTTGGGCTCTGGTCAAAGTCGCTCAGCCTGGTGATGTTGTGGTTGCTCTTAATGTTCTTGGCAACAATCAAATCGTCGATCGAGAAGGGAAATTGTCCCTTCTTTCGCTTGTCAACGCATTCGACTCTGTTCTTGCGGTTTATGAAGGTTTCTGCAATTTAAAACAGGTGGATCTCAAGCTCAAAGTTTGCAGAGGTCCATCAGTGAGGAAAATTTTAATCCGAGAAGCAAATGCTTATTCCGCAACTCATCTTATAGTAGGAACAGCACATGGCCTTCATACAATTCGGCCATCTACCTCTGTAGCTAAGTACTGTGCCAAAAAGTTATCCAGGAACTGCTGTGTTCTGGCTGTTAATAATGGGAAAGTTGTGTTCAAGAGAGATGGCTCCCCAGCAACACCTTCTCACTCAAAAGGAATTGATCGTCAGAACAAGATTGGTTTGCTTGAAACTATTCACCGGACATTTAATAAGAGTTCTAAAGTACTAAATGACGACAATACAGAAAATAAGCAGGGGAAAGATTTTCTGGGGTCTAAAGAATCTGTGATTCAGAAACCAAGATGCTCAATATGTGGCTCAATTTCAGCACTGCCAAACATGTCCTGCCACCATTCTGCAGAGAAGCCTTCAGGTGATGGTGGTACCAACGAAAATGCTTTGGCCATAGTGCCTGTACAGACAACTGAGACAAGATCAAGTACTGCAACAACTTTGTCTGACAGAGAACTACCTGAGCTGAAACCTGGTTGGCCACTGTTACAAAGGAAAGTTTTATCAGATAGAGAGTCCAATGATCCATCATCCATGTGTCAGGTATCTGTGGTCCAGTGGGCAATGCAGTTGCCTTGTAGAAATCTTTCATATGACACAGCAGATCATGATCATAAACAAGCTATAGCTTTAGATGGCAGAAATGGTGCTATTGTTCCAGTTGATGTTGTAATAAGGACTGATTCTTCTTCACCAGACGGCAATTCTAAAGGCATTCCTAAAGAATTGGAGGATCTTCACGAGAAATACTCATCCTCGTGCAGATTGTTTCAGTACCAGGAACTTGTACGGGCAACTTCAAATTTCTCGCGAGAAAATTTGATTGGAAAAGGAGGAAGTAGTCAGGTTTATTGGGGTTGCCTTCCTGATGGCAAGGAGCTTGCCGTTAAGATCTTAAAGCCTTCTGATGATGTTTTGAAGGAGTTTCTATTGGAAATAGAAATTATCACTACCTTGCACCATAAAAACATTATTTCCCTCCTGGGTTTCTGCTTTGAGGATGGCAATCTTCTTTTGGTATATGATTTTTTGCCTAGAGGAAGCCTTGAAGACAATCTTTATGGGAGTAAGAAAAATCCACTTGTTTTTGGCTGGACTGAGAGATATAAGGCGGCAATAGGTGTGGCTGAGGCTCTGGACTATCTGCATAACAACGGTACTCAGTCTGTGATCCACAGGGATGTGAAGTCATCAAATGTATTATTATCTGAGGACTTTGAGCCCCAGCTCTCTGATTTTGGTCTTGCTAAATGGGCTTCCACCCCATCTTCACATATAACCTGCACAGTCGTTGCTGGAACTTTCGGTTATTTGGCTCCAGAATACTTCATGTATGGCAAAGTCAATGCCAAGATTGATGTGTACGCATTTGGTGTCGTACTCCTAGAACTTCTTTCTGGAAGAAAACCCATAGGTGGAGATTACCCTAAAGGACAAGAGAGCCTCGTTATGTGGGCAAGTCCAATTCTTAATGACGGAGAGTTGTCACAATTGTTAGATCCAAGTTTGAGCGATAGCTATGTTCATGAACAGATGGAGAGGATGGCGTTGGCAGCCAAACTTTGTATAAGACGTGATCCAAGAGCCAGGCCTCCTATGAGCCTTATTTCAAAGCTTCTTCAAGGGGATGTTGATGCAATCAAGTGGGCAAGGTTAGAGGTTAACGCTTCGGAGAAGCCGGGGATGCTTGACGATGAAGAGTGTCCACCTTCAAATTTGCAGTCACATCTTCTTGTTGCACTGCTTGACGTGGAAGATGACTCGTCCATGAGCAGTATTGAGCAGAAAGTGTCGTTGGAGGACTACTTAAGAGGGCGATGGAGCCACTCTTCCAGCTTCGACTGA 2229 0.4392 MKILQMGEAGEVDGGSSDGRTVVVGMKLDTASKELLTWALVKVAQPGDVVVALNVLGNNQIVDREGKLSLLSLVNAFDSVLAVYEGFCNLKQVDLKLKVCRGPSVRKILIREANAYSATHLIVGTAHGLHTIRPSTSVAKYCAKKLSRNCCVLAVNNGKVVFKRDGSPATPSHSKGIDRQNKIGLLETIHRTFNKSSKVLNDDNTENKQGKDFLGSKESVIQKPRCSICGSISALPNMSCHHSAEKPSGDGGTNENALAIVPVQTTETRSSTATTLSDRELPELKPGWPLLQRKVLSDRESNDPSSMCQVSVVQWAMQLPCRNLSYDTADHDHKQAIALDGRNGAIVPVDVVIRTDSSSPDGNSKGIPKELEDLHEKYSSSCRLFQYQELVRATSNFSRENLIGKGGSSQVYWGCLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLPRGSLEDNLYGSKKNPLVFGWTERYKAAIGVAEALDYLHNNGTQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTPSSHITCTVVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLSGRKPIGGDYPKGQESLVMWASPILNDGELSQLLDPSLSDSYVHEQMERMALAAKLCIRRDPRARPPMSLISKLLQGDVDAIKWARLEVNASEKPGMLDDEECPPSNLQSHLLVALLDVEDDSSMSSIEQKVSLEDYLRGRWSHSSSFD 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00329 742 ProSiteProfiles Protein kinase domain profile. 397 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00329 742 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 366 471 - -
Accr4g00329 742 PANTHER OS08G0249100 PROTEIN 215 679 IPR046958 -
Accr4g00329 742 Gene3D Transferase(Phosphotransferase) domain 1 472 684 - -
Accr4g00329 742 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 156 - -
Accr4g00329 742 SUPERFAMILY Protein kinase-like (PK-like) 378 667 IPR011009 -
Accr4g00329 742 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Accr4g00329 742 Gene3D Phosphorylase Kinase; domain 1 364 471 - -
Accr4g00329 742 Gene3D HUPs 19 157 IPR014729 -
Accr4g00329 742 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Accr4g00329 742 FunFam Putative receptor-like serine/threonine-protein kinase 472 684 - -
Accr4g00329 742 Pfam Universal stress protein family 20 148 IPR006016 -
Accr4g00329 742 SMART serkin_6 397 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00329 742 CDD USP_Like 21 155 - -
Accr4g00329 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Accr4g00329 742 Pfam Protein kinase domain 398 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00329 Accr-Chr4 3173815 3176946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00329 353 667 Trihelix Transcription Factor Family AT1G68690 43.125 9.78e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr4g00329 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00329 - - pcin:129303222 1023.46