Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00319 ATGAGGAAGAAGCTGGATACTTGTTTCCCTGCTTCTCGGATTAAAAAGATAATGCAAGCAGATGAAGATGTTGGGAAGATAGCACTAGCAGTGCCCGTTTTAGTTTCTAAAGCTTTAGAGCTGTTTTTGCAAGACCTTTGTGATCGTACATATGAAGTAACTCTTCAGAGAGGAGCAAAGACGATGAGTGCATTGCATCTTGATCTGGATAGCGCACACTACATTGAAAGGTTTGAAAAATAG 243 0.4033 MRKKLDTCFPASRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEVTLQRGAKTMSALHLDLDSAHYIERFEK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00319 80 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Accr4g00319 80 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 68 IPR003958 -
Accr4g00319 80 SUPERFAMILY Histone-fold 3 69 IPR009072 GO:0046982
Accr4g00319 80 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 8 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00319 Accr-Chr4 3087628 3089233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00319 1 78 CCAAT-HAP5 Transcription Factor Family AT3G12480 80.769 1.11e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr4g00319 CBFD_NFYB_HMF 1.5e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00319 K21752 - aew:130777462 127.102