Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00318 ATGGCATCGTCATCGAATTCACCATGTGCGGCTTGCAAGTTTCTTCGGCGAAAGTGCCAACCAGAGTGTGTGTTTGCACCCTACTTCCCGCCAGATCAGCCGCAAAAATTCGCAAACGTGCACAAAGTATTTGGAGCGAGCAATGTCACCAAACTCCTCAACGAGTTACACCCCCACCAGCGTGAAGACGCCGTCAATTCTCTCGCCTACGAGGCCGACATGCGCCTCCGTGATCCCGTCTACGGGTGCGTCGGAGTCATCTCTCTCCTCCAACACCAACTCCGCCAGCTCCAAATGGACCTCACCTGCGCGAAGTCCGAGCTGTCCAGGTACCAGACCTTGGGCATCACCGGCCACAGCCTCATCACCGCCCACCACCAGGCCCAAAACATGGGCATGAACCTGATTGGCGACCACTACCACCACCACCAGTTCTTCCCCCGGGACCACCATCAGTCCTCCATGATCAGGACATTTGATGCGGGTAACAACTATGACGGCGGTCTCCTGTCCATGAACGTCTCCGCAAGCATAGGGCAGCTCAGCCAGTTTCAGCATCAGCACCCTAGAGCTGCCGCCGGCGACGATCGTCGGACTATTGATCCCTCTTAG 612 0.5703 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHSLITAHHQAQNMGMNLIGDHYHHHQFFPRDHHQSSMIRTFDAGNNYDGGLLSMNVSASIGQLSQFQHQHPRAAAGDDRRTIDPS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00318 203 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Accr4g00318 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 147 - -
Accr4g00318 203 Coils Coil 87 114 - -
Accr4g00318 203 MobiDBLite consensus disorder prediction 182 203 - -
Accr4g00318 203 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00318 Accr-Chr4 3074413 3075024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00318 2 203 AS2 family AT1G65620 72.222 2.31e-95 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr4g00318 LOB 2.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00318 - - jre:109004073 351.673