Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00317 ATGGCGTTTGCCGCCGCCCAATCCCTGCCTGGTTGCCTCCAAAAATGCGGGCAAGTTGAGATTCCATATCCATTCGGGGTGGGTGTTCAATCTGGTACCGGTAATAACAACTGTTTCTTCCAGGAGGCGTTTCAAATGGATTGTAGAAACTCGACGTTATTTCACGGTAACGCCGAAATTTCAAGCATTTCCCTCAAAGGTCAAATGGATATGTGCATGCCTGTTTCCAGGATTTGTTTCAATGATACAGGCGGAGAAATAGGCAAGATTAGCGTCAGTCTTTCTACCCCAGGTTTCACCATCTCCAGCAGTGAAAACAAGTTCGTGAGCGTTGGCTGCGACACTTACGGCTACTTAAACAGTTTCCAAAACAGTCATACATATTCCACCGGCTGCTTGACGCGATGTTACGGAGTGCCCAGTTATCAGCAGGACGATGGAACTTGTTCTGGGATTGGGTGCTGCCGGGTGGATATTCCTCTGGGAATGAGGAACATCAGCATTGAAGCCTTCAGCTTTAATTCGCAGCAAAAGGCGTCTGATTTCAACAATTGTAGCTATGCTTTTGTGGCCAAGGAAGGGTGGTTTAATTTCTCCACGGCTGATCTCAGGTCCTTACCATTTGATAAGGCACTGCTGGTTGTAGATTGGGCTATTTCCGACGGCACATGTGAGAATGAGAGGACATCACAGGATTATGCCTGCAAATCCAACACCCACTGTGAAGACTCGGGATATGGATTCGGGTACCGGTGCATATGCGAACCCGGTTTTGAAGGGAACCCTTATCTTCCCGAGGGTTGCCGAGATATAGACGAGTGTAAGGAATCGACCCATGACTGCACAAGTGAAGATAACTGTCGTAACACGGTTGGGTCTTATGAATGTTTTTGCCCTCGCGGCTACACTGGGACTGGAACTAAGGGAACAGGATGCCACCCGCCATGGCGCCACAATTCACTTACAATACTTCACATTGTTGCAAGCGTGGGATTGATAGTTCTGTTTGTGAGTGTGGCCTGGCTGTATTTGATATACCAGAAGAGGAAGCTAATGAAGGAGAAGGAGAAATTCTTTCGACAAAATGGAGGCGATATTTTGCAACAAAAGCTCTCTGTAAAACAGGATTCCTCCCTCACAGCCAAAATCTTTACTGCTCAAGAATTGAAAAGGGCTACCAACAACTTTCACGACAGCTTAGTTATTGGCCAAGGCGGTTTCGGCACTGTTTACAAAGGAATTCTCCCAGACAACACTGTTGTCGCAATCAAGAAATCAAAACTGATGGAACAAAGCCAAATTGAACAATTCATTAATGAGGTGATGATACTTTCCCAGATAAATCACAGGAACGTGGTCAAACTCCTTGGTTGTTGTCTAGAAACAGAGGTTCCTTTATTAGTCTATGAGTTCGTTAATAATGGCACCCTATTCGAATCCATACATAACAAAAGCAAAGCTTGTGCTTTTACTTGGGAAACCCGTCTGAGGATAGCAGCAGAAGTAGCAGGAGCACTGTCTTATCTACACTCTGCTGCCTCCACACCCATCATCCTCAGAGACGTCAAGTCCGCTAACATCCTTCTGGACAAGACTTTAACCGCCAAAGTCTCTGATTTTGGAGCCTCCAGATTAATGCCACTAGATCAAGTGGAGCTAGCCACGATGGTACAAGGAACTTTCGGATACTTGGATCCCGAATACATGCAAACGAACCAACTCACTGAGAAGAGCGATGTGTACAGTTTTGGGGTTGTAGTTCTGGAACTCCTAACAGGAAGAAAGGCAGTGTCATTTGATGGGCCAGAAGAGGAAAGAAGCCTTGCAATGCACTTCCTATCATCCTTAAATGAAAGTCGCTTGTTTGAACTGGTTGAGAGAGGGATGGTTAATGATGAAAATGAGAAGACGCTGAAGGAAGTGGCTGAGCTTGCAGCGAAGTGCTTGAGGCTTAAAGGAGAGGAGAGACCAAGCATGAAGGAAGTGGCAATGGAGTTGGAGGGAATAAGGATGACAGGGAAACATCCATGGATCAACAAACACTTCAATAATGCCGCGGAATCACACTCATTACTTCCTCAACAGACGTCCCGTTTGACTGAATCTGTTGATAGCATTGTTTATAGAAACACTGCGTGGGATAGCATTACAGATGGTGTGCCGATTGATTTAGATGATGGAAGATGA 2187 0.4568 MAFAAAQSLPGCLQKCGQVEIPYPFGVGVQSGTGNNNCFFQEAFQMDCRNSTLFHGNAEISSISLKGQMDMCMPVSRICFNDTGGEIGKISVSLSTPGFTISSSENKFVSVGCDTYGYLNSFQNSHTYSTGCLTRCYGVPSYQQDDGTCSGIGCCRVDIPLGMRNISIEAFSFNSQQKASDFNNCSYAFVAKEGWFNFSTADLRSLPFDKALLVVDWAISDGTCENERTSQDYACKSNTHCEDSGYGFGYRCICEPGFEGNPYLPEGCRDIDECKESTHDCTSEDNCRNTVGSYECFCPRGYTGTGTKGTGCHPPWRHNSLTILHIVASVGLIVLFVSVAWLYLIYQKRKLMKEKEKFFRQNGGDILQQKLSVKQDSSLTAKIFTAQELKRATNNFHDSLVIGQGGFGTVYKGILPDNTVVAIKKSKLMEQSQIEQFINEVMILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFESIHNKSKACAFTWETRLRIAAEVAGALSYLHSAASTPIILRDVKSANILLDKTLTAKVSDFGASRLMPLDQVELATMVQGTFGYLDPEYMQTNQLTEKSDVYSFGVVVLELLTGRKAVSFDGPEEERSLAMHFLSSLNESRLFELVERGMVNDENEKTLKEVAELAAKCLRLKGEERPSMKEVAMELEGIRMTGKHPWINKHFNNAAESHSLLPQQTSRLTESVDSIVYRNTAWDSITDGVPIDLDDGR 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00317 728 ProSiteProfiles Protein kinase domain profile. 396 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00317 728 FunFam Wall-associated receptor kinase 2 472 689 - -
Accr4g00317 728 Pfam Wall-associated kinase 148 255 IPR013695 GO:0004674|GO:0016020
Accr4g00317 728 Gene3D Laminin 219 312 - -
Accr4g00317 728 Gene3D Transferase(Phosphotransferase) domain 1 472 688 - -
Accr4g00317 728 Gene3D Phosphorylase Kinase; domain 1 361 471 - -
Accr4g00317 728 ProSitePatterns Calcium-binding EGF-like domain signature. 270 296 IPR018097 GO:0005509
Accr4g00317 728 Pfam Protein kinase domain 397 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00317 728 SMART egf_5 223 269 IPR000742 -
Accr4g00317 728 SMART egf_5 273 313 IPR000742 -
Accr4g00317 728 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Accr4g00317 728 ProSiteProfiles EGF-like domain profile. 270 313 IPR000742 -
Accr4g00317 728 SMART serkin_6 396 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00317 728 CDD STKc_IRAK 402 669 - -
Accr4g00317 728 FunFam Fibrillin 2 265 310 - -
Accr4g00317 728 Pfam Calcium-binding EGF domain 270 312 IPR001881 GO:0005509
Accr4g00317 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 5 675 IPR045274 GO:0007166
Accr4g00317 728 CDD EGF_CA 270 299 - -
Accr4g00317 728 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 287 298 IPR000152 -
Accr4g00317 728 FunFam Wall-associated receptor kinase 2 366 471 - -
Accr4g00317 728 SMART egfca_6 270 313 IPR001881 GO:0005509
Accr4g00317 728 SUPERFAMILY Protein kinase-like (PK-like) 382 698 IPR011009 -
Accr4g00317 728 SUPERFAMILY EGF/Laminin 270 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00317 Accr-Chr4 3068923 3071346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00317 3 728 Receptor kinase-like Gene Family AT1G21230 43.784 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g00317 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00317 - - gmx:100819535 860.522