Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00316 ATGTGGAAGGCCATTAAAATCTGTTGGTGGTGGTGGATGAGTGCATTAGCAGTTATGGCGTTTGCCGCCGCCCAATCCCTGCCTGGTTGCCTCCAAAAATGCGGGCAAGTTGAGATTCCATATCCATTCGGGGTGGGTGTTCAATCTGGTACCGGTAATAACAACTGTTTCTTCCAGGAGGCGTTTCAAATGGATTGTAGAAACTCGACGTTATTTCACGGTAACGCCGAAATTTCAAGCATTTCCCTCAAAGGTCAAATGGATATGTGCATGCCTGTTTCCAGGATTTGTTTCAATGATACAGGCGGAGAAATAGGCAAGATTAGCGTCAGTCTTTCTACCCCAGGTTTCACCATCTCCAGCAGTGAAAACAAGTTCGTGAGCGTTGGCTGCGACACTTACGGCTACTTAAACAGTTTCCAAAACAGTCATACATATTCCACCGGCTGCTTGACGCGATGTTACGGAGTGCCCAGTTATCAGCAGGACGATGGAACTTGTTCTGGGATTGGGTGCTGCCGGGTGGATATTCCTCTGGGAATGAGGAACATCAGCATTGAAGCCTTCAGCTTTAATTCGCAGCAAAAGGCGTCTGATTTCAACAATTGTAGCTATGCTTTTGTGGCCAAGGAAGGGTGGTTTAATTTCTCCACGGCTGATCTCAGGTCCTTACCATTTGATAAGGCACTGCTGGTTGTAGATTGGGCTATTTCCGACGGCACATGTGAGAATGAGAGGACATCACAGGATTATGCCTGCAAATCCAACACCCACTGTGAAGACTCGGGATATGGATTCGGGTACCGGTGCATATGCGAACCCGGTTTTGAAGGGAACCCTTATCTTCCCGAGGGTTGCCGAGATATAGACGAGTGTAAGGAATCGACCCATGACTGCACAAGTGAAGATAACTGTCGTAACACGGTTGGGTCTTATGAATGTTTTTGCCCTCGCGGCTACACTGGGACTGGAACTAAGGGAACAGGATGCCACCCGCCATGGCGCCACAATTCACTTACAATACTTCACATTGTTGCAAGCGTGGGATTGATAGTTCTGTTTGTGAGTGTGGCCTGGCTGTATTTGATATACCAGAAGAGGAAGCTAATGAAGGAGAAGGAGAAATTCTTTCGACAAAATGGAGGCGATATTTTGCAACAAAAGCTCTCTGTAAAACAGGATTCCTCCCTCACAGCCAAAATCTTTACTGCTCAAGAATTGAAAAGGGCTACCAACAACTTTCACGACAGCTTAGTTATTGGCCAAGGCGGTTTCGGCACTGTTTACAAAGGAATTCTCCCAGACAACACTGTTGTCGCAATCAAGAAATCAAAACTGATGGAACAAAGCCAAATTGAACAATTCATTAATGAGGTGATGATACTTTCCCAGATAAATCACAGGAACGTGGTCAAACTCCTTGGTTGTTGTCTAGAAACAGAGGTTCCTTTATTAGTCTATGAGTTCGTTAATAATGGCACCCTATTCGAATCCATACATAACAAAAGCAAAGCTTGTGCTTTTACTTGGGAAACCCGTCTGAGGATAGCAGCAGAAGTAGCAGGAGCACTGTCTTATCTACACTCTGCTGCCTCCACACCCATCATCCTCAGAGACGTCAAGTCCGCTAACATCCTTCTGGACAAGACTTTAACCGCCAAAGTCTCTGATTTTGGAGCCTCCAGATTAATGCCACTAGATCAAGTGGAGCTAGCCACGATGGTACAAGGAACTTTCGGATACTTGGATCCCGAATACATGCAAACGAACCAACTCACTGAGAAGAGCGATGTGTACAGTTTTGGGGTTGTAGTTCTGGAACTCCTAACAGGAAGAAAGGCAGTGTCATTTGATGGGCCAGAAGAGGAAAGAAGCCTTGCAATGCACTTCCTATCATCCTTAAATGAAAGTCGCTTGTTTGAACTGGTTGAGAGAGGGATGGTTAATGATGAAAATGAGAAGACGCTGAAGGAAGTGGCTGAGCTTGCAGCGAAGTGCTTGAGGCTTAAAGGAGAGGAGAGACCAAGCATGAAGGAAGTGGCAATGGAGTTGGAGGGAATAAGGATGACAGGGAAACATCCATGGATCAACAAACACTTCAATAATGCCGCGGAATCACACTCATTACTTCCTCAACAGACGTCCCGTTTGACTGAATCTGTTGATAGCATTGTTTATAGAAACACTGCGTGGGATAGCATTACAGATGGTGTGCCGATTGATTTAGATGATGGAAGATGA 2241 0.4565 MWKAIKICWWWWMSALAVMAFAAAQSLPGCLQKCGQVEIPYPFGVGVQSGTGNNNCFFQEAFQMDCRNSTLFHGNAEISSISLKGQMDMCMPVSRICFNDTGGEIGKISVSLSTPGFTISSSENKFVSVGCDTYGYLNSFQNSHTYSTGCLTRCYGVPSYQQDDGTCSGIGCCRVDIPLGMRNISIEAFSFNSQQKASDFNNCSYAFVAKEGWFNFSTADLRSLPFDKALLVVDWAISDGTCENERTSQDYACKSNTHCEDSGYGFGYRCICEPGFEGNPYLPEGCRDIDECKESTHDCTSEDNCRNTVGSYECFCPRGYTGTGTKGTGCHPPWRHNSLTILHIVASVGLIVLFVSVAWLYLIYQKRKLMKEKEKFFRQNGGDILQQKLSVKQDSSLTAKIFTAQELKRATNNFHDSLVIGQGGFGTVYKGILPDNTVVAIKKSKLMEQSQIEQFINEVMILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFESIHNKSKACAFTWETRLRIAAEVAGALSYLHSAASTPIILRDVKSANILLDKTLTAKVSDFGASRLMPLDQVELATMVQGTFGYLDPEYMQTNQLTEKSDVYSFGVVVLELLTGRKAVSFDGPEEERSLAMHFLSSLNESRLFELVERGMVNDENEKTLKEVAELAAKCLRLKGEERPSMKEVAMELEGIRMTGKHPWINKHFNNAAESHSLLPQQTSRLTESVDSIVYRNTAWDSITDGVPIDLDDGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00316 746 CDD STKc_IRAK 420 687 - -
Accr4g00316 746 ProSiteProfiles EGF-like domain profile. 288 331 IPR000742 -
Accr4g00316 746 SMART egfca_6 288 331 IPR001881 GO:0005509
Accr4g00316 746 SMART serkin_6 414 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00316 746 FunFam Wall-associated receptor kinase 2 384 489 - -
Accr4g00316 746 SMART egf_5 291 331 IPR000742 -
Accr4g00316 746 SMART egf_5 241 287 IPR000742 -
Accr4g00316 746 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Accr4g00316 746 Gene3D Phosphorylase Kinase; domain 1 379 489 - -
Accr4g00316 746 SUPERFAMILY EGF/Laminin 288 323 - -
Accr4g00316 746 ProSitePatterns Calcium-binding EGF-like domain signature. 288 314 IPR018097 GO:0005509
Accr4g00316 746 FunFam Wall-associated receptor kinase 2 490 707 - -
Accr4g00316 746 ProSiteProfiles Protein kinase domain profile. 414 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00316 746 CDD EGF_CA 288 317 - -
Accr4g00316 746 Pfam Wall-associated kinase 166 273 IPR013695 GO:0004674|GO:0016020
Accr4g00316 746 FunFam Fibrillin 2 283 328 - -
Accr4g00316 746 Gene3D Laminin 237 330 - -
Accr4g00316 746 Gene3D Transferase(Phosphotransferase) domain 1 490 706 - -
Accr4g00316 746 Pfam Protein kinase domain 415 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00316 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 694 IPR045274 GO:0007166
Accr4g00316 746 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 305 316 IPR000152 -
Accr4g00316 746 SUPERFAMILY Protein kinase-like (PK-like) 400 716 IPR011009 -
Accr4g00316 746 Pfam Calcium-binding EGF domain 288 330 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00316 Accr-Chr4 3068923 3071400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00316 16 746 Receptor kinase-like Gene Family AT1G21230 43.758 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g00316 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00316 - - gmx:100819535 860.522