Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00315 ATGGAGACGATGCGATTTACGAAGCTTTGGCTATGGATTCCATTATTATTAGTAGCCACTGCAGAAGCTCAATCCCTTGAAGGCTGCCTCAATAAATGTGGAGATGTGGAGATTCCATATCCTTTTGGTATTGGTGTGCAATCTCGTACTGGTCGCAACTGTTCCTTGCAAGAATCTTTTGAGCTCACTTGCAATTCTTCCACCTCCACGTTGTTGTACGGAGACCACCCTGTTTCTAACATATCAGTCCAAGGTGGTCATCTTGACATTTCCATGTCCGTCTCCAAGGTTTGTTACAATCAACCTGGCGTCGCTCTGCTTAACCCTCAGTCTCTTGTAAACAATCCTTCTTTCGCCGTTTCCAGCGTCCAAAACAAGTTCATAAGCGTTGGTTGCGACACTTTGGGCATAGTTCAATTTCAAAACAACCGTACTTCTTATGGTGGCTGCGTGACGCTGTGTAACGCGCCTCCTCAACAAGACTTGAATGACAAAACTTGTTCGGGAACTGGGTGTTGCCAGGTGGATATTCCTGTCGGAATGAGGAATATCACTGTTGTAGCATCTTCCGTCTTCAACCACACGAACGTGTCGGATTTCAACAACTGTAGCTACGGCTTTGTTGCCAAACAGAATTGGTTTAATTTCTCCGTTGATTATCTACGTGACTTCCCCTTTGACATGGTCCCGCTTGTCCTAGATTGGACTGTTTCAGATCATACTTGTCATGCAGCTTCGACCAGGTCGGATTATGCCTGCACCGCTAATACTGATTGTGCCGACTCCGATGATGGATTCGGGTACAACTGCAAATGCAAACCCGGTTTTGATGGAAACCCGTACCATCCAGATGGATGTCACGATGTAGACGAATGCCAGCAGGAATCGGCCAACAATTGCATAAGTAAAGAAAATTGCCGTAACACGATTGGATCTTTTGAGTGTTTTTGCCCACCTGGCTACTCAGGGAATGGAACCACCGCCGGAGGATGCTACCCACCTTTGTCCAAAAATCCACTTACTATGGTCTTCACCGGTATAAGTATAGGCTTGGCGGCTCTCTTTATGAGTATGTCTTGGTTGTACTTGGTCTCCCAGAAGAGGAAGCACATGAAGCAAAAGGAAAAATTCTTTCGTCAGAACGGTGGTTCAATCTTGCAGCAGCAACTCTCCGGGAGACATGAGACATCCCTTGCGGTTAAAATCTTTACTGCTGAGGAATTGAAAAGGGCCACCAACAACTATCATGACAACTTGATCATCGGCAGAGGAGGTTTTGGTACTGTTTACAAAGGATTTCTCACAGACAAGAAAATCGTTGCAATCAAGAAATCCAAGCTGATGAACCAAAGCCAAGTCGAGCAATTCATTAACGAGGTGATTGTGCTCTCCCAAATAAATCACCGTAATATAGTCAAGCTCCTAGGTTGTTGTCTAGAAACAGAAGTTCCTTTACTGGTCTACGAGTTTATTAATAACGGCACCCTCTATGATTTAATACATAACAAAGGAAAATCTGCTCTGGTGACTTGGGAAACACGTCTGAGGATAGCATCAGAAGTAGCAGGAGCACTGTCTTATCTTCATTCTGCTGCTTCCATTTCCATAGTTCACAGAGATGTCAAGTCCGCTAACATTCTTCTAGACGAGAGCTGCACCGCCAAGGTGTCTGATTTTGGAGCTTCCAGATTGGTTCCACTCGATCAAACAGCGTTAGCCACAATGGTACAGGGCACTTTTGGATATTTGGATCCAGAATACATGCAAACAAATCAGCTGACAGAGAAGAGTGATGTGTATAGTTTTGGGGTGGTGGTTATAGAGCTGCTAACAGGGAAGAAAGCTGTTTCGTTTGAGAGGCCAGAAGAGGAAGTGAATCTGGCCATGCACTTCCTTTCATACTTGAAACAGGGTCACTTACATGAAATTCTTGAGGATGGAATAATAAATAATGAAAATAAGGAGAGGGTGAAAGAGGTGGCTATGCTCGCAGCAAGGTGTGTGAGATTAAGAGGAGAGGAGAGACCAAGCATGAAGGAAGTAGCAGCAGAATTGGAGGGAATAAAGATGGTGGGGGATCAGTTAGGGGTGAAAAGGGAGCTGAATTTGGAGGAAACTCAAACATTGCTGGGAGAGACATCCAAGTTTAATGAATATGGAGATAGCATTGATCATGGAAATAGAGTTTGGGATAGTATTACGGATCATGTTCTAATTGACTTTGACAGCGGTAGATGA 2238 0.4441 METMRFTKLWLWIPLLLVATAEAQSLEGCLNKCGDVEIPYPFGIGVQSRTGRNCSLQESFELTCNSSTSTLLYGDHPVSNISVQGGHLDISMSVSKVCYNQPGVALLNPQSLVNNPSFAVSSVQNKFISVGCDTLGIVQFQNNRTSYGGCVTLCNAPPQQDLNDKTCSGTGCCQVDIPVGMRNITVVASSVFNHTNVSDFNNCSYGFVAKQNWFNFSVDYLRDFPFDMVPLVLDWTVSDHTCHAASTRSDYACTANTDCADSDDGFGYNCKCKPGFDGNPYHPDGCHDVDECQQESANNCISKENCRNTIGSFECFCPPGYSGNGTTAGGCYPPLSKNPLTMVFTGISIGLAALFMSMSWLYLVSQKRKHMKQKEKFFRQNGGSILQQQLSGRHETSLAVKIFTAEELKRATNNYHDNLIIGRGGFGTVYKGFLTDKKIVAIKKSKLMNQSQVEQFINEVIVLSQINHRNIVKLLGCCLETEVPLLVYEFINNGTLYDLIHNKGKSALVTWETRLRIASEVAGALSYLHSAASISIVHRDVKSANILLDESCTAKVSDFGASRLVPLDQTALATMVQGTFGYLDPEYMQTNQLTEKSDVYSFGVVVIELLTGKKAVSFERPEEEVNLAMHFLSYLKQGHLHEILEDGIINNENKERVKEVAMLAARCVRLRGEERPSMKEVAAELEGIKMVGDQLGVKRELNLEETQTLLGETSKFNEYGDSIDHGNRVWDSITDHVLIDFDSGR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00315 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Accr4g00315 745 Gene3D Laminin 240 331 - -
Accr4g00315 745 SUPERFAMILY EGF/Laminin 288 325 - -
Accr4g00315 745 Pfam Wall-associated receptor kinase galacturonan-binding 29 85 IPR025287 GO:0030247
Accr4g00315 745 ProSitePatterns Calcium-binding EGF-like domain signature. 288 315 IPR018097 GO:0005509
Accr4g00315 745 Gene3D Transferase(Phosphotransferase) domain 1 491 702 - -
Accr4g00315 745 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Accr4g00315 745 SMART egf_5 291 332 IPR000742 -
Accr4g00315 745 SMART egf_5 241 287 IPR000742 -
Accr4g00315 745 ProSiteProfiles EGF-like domain profile. 288 327 IPR000742 -
Accr4g00315 745 Pfam Protein kinase domain 415 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00315 745 FunFam Fibrillin 2 283 329 - -
Accr4g00315 745 Gene3D Phosphorylase Kinase; domain 1 379 490 - -
Accr4g00315 745 FunFam Wall-associated receptor kinase 2 491 708 - -
Accr4g00315 745 SMART serkin_6 415 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00315 745 Pfam Calcium-binding EGF domain 288 331 IPR001881 GO:0005509
Accr4g00315 745 FunFam Wall-associated receptor kinase 2 385 490 - -
Accr4g00315 745 SMART egfca_6 288 332 IPR001881 GO:0005509
Accr4g00315 745 CDD EGF_CA 288 323 - -
Accr4g00315 745 CDD STKc_IRAK 421 688 - -
Accr4g00315 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 689 IPR045274 GO:0007166
Accr4g00315 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Accr4g00315 745 ProSiteProfiles Protein kinase domain profile. 415 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00315 745 SUPERFAMILY Protein kinase-like (PK-like) 395 686 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00315 Accr-Chr4 3057664 3060310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00315 4 745 Receptor kinase-like Gene Family AT1G21230 45.526 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g00315 Pkinase 4.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00315 - - gmx:100819535 833.172