Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00314 ATGGCTGATCTAAAGATGATGTTGTTCATTCTATTATTTGCTGCAGCCATGGCGGCAAGTGAAGCTCAATCCCTCGCAGGCTGTCTCAACAAATGCGGTGACGTGGACATTCCGTATCCATTTGGTGTGGGAGTTCAACCTGGTACTTCTCGCAACTGTTTCTTGGACGAAACATTCCAGCTCACCTGCGACAAGTCCACATTATTCCTCAAAGACCTCCCAGTTTCTAACATATTCCTCCAAGAGGGTCAAATCGACATTTCCATGCATATCTCCAGGGTCTGTTTCGATCGCTCAGGAGTAGTTCTAGACCAATCTATTTCCAATTTTTACACCGGTGGTGCTTTCACCATTTCCAGCGGCAAAAACACGATCATAAGTCTTGGTTGCGACACTTTGAGCTTTGCCTATTTCCCGGACCACAATCTTAGCTATTCAGGTGGCTGCGTAACGCTGTGCGATACGCCGCCTCCAAAGGAAACCAACCCCAACACATGTTCGGGGTCAGGGTGTTGCCAGGTCAATAATATTCCCATTGGAAAGAAAAACTACTCGTTGGCAGTATCCACCTTCAACAACCATACAAAAGTGTTGGCCTTCAACAACTGCAGCTATTCTTTTCTCGCCAAACAGGGCTGGTTTAATTTCTCTCTTGATTATCTACACTACTTTCCCTTTGATATGGCCCCCTTCTCCCTAGATTGGACTATTTCCAATAGTACCTATGCCTGCAAATCCAACTCCTATTGCATGGATTCTAAGGTTGGAGCTGGCTTCAATTGCAAATGCAAACTTGGCTTTGAGGGGAATCCATATCATCCCGATGGATGTCACGATGTTGATGAGTGTAGCAGACCCAACAACTGCAGTATCCCAAAGCAATGCTACAACTTCGTCGGTGGTTACAGCTGTTCTTGTCCACCTCATTATAAGGGCGACGGCTACACTAATGGGACGGGCTGTACAAAGGACCATCGTCGATCTATGTATAAATGGGTTGTCATTATAATTGCTTTGGGTTGTAGTGTGGGCTTACTGGTTGTCATCGCAGTTGTCTTATCAGTGGGTTGGGCAGACAAGCAAAAATCGTTGAAAGATCTCAGAAAAAGAAATTTTGAGCAGAACGGAGGATGCGTGCTGCTTGGACAACTTTCACAAAAAGAAGGATACACTGAGAGAACAAAAATATTCAAAGAAGTTCAACTTATAAATGCCACAAACAACTTTCATCAGAGTAGAGTAATTGGTACTGGGGGACAATGCATAGTCTATAAGGGTATATTGCCTAACAATACTCCCGTTGCAATTAAAAAGGCTAAAGTAGGAGATGATCCTAGACAAATTAGGGATTTCATTAGTGAAGTAGCCGTGCTTTCCCAAATCAACCACAAAAATGTTGTTAGACTTTTGGGATGTTGCCTGGAAACAAAAATTCCTTTATTAGTCTATGAATTTGTGGACAATGGCACACTTCTTGACCACATAAATCCTACAAAGACTACATCTCCTATTTCATGGGAGGCTCGATTAAAGATAGCTACAGAAACTGCCGAGGCAATTTCATATTTGCACTCTGTCACTTCAATTCCCATTGTCCATCGGGATATCAAGTTTGCTAATATACTTTTAGACTGTAATTACAAAGCAAAGGTGTCTGACTTTGGAGCTTCAAGACTCGTTCCTCTGGACAATTCTGATGTTTGCACGGTGGTGCAAGGTACTTTTGGGTACTTGGATCCAGAATACCTCCACACAGGTCAACTGAATGAAAAAAGTGATGTTTATAGTTTTGGAGTTGTCCTCATGGAATTGCTCACCGCAAGTAAAGTAGTTGAATTCAATAGACAAGGAAAAGTGAATCTGGCGACGCATTTTGAGTCTTCAATGAAAGCAAACCGTCTGCGGGAAATTCTTGATAAATGGGTGTTAGATGAAAAGAATGGAGAGGAGATGGAAGAAGTGGCTTTATTAGCAATGAGGTGTATTAGCGTAAAAAGAGAGGAAAGGCCAACGATGAAAGAAGTAGCAAAAGAGCTAGATTTGATTGCAAATAAAGCGCGATGA 2064 0.4254 MADLKMMLFILLFAAAMAASEAQSLAGCLNKCGDVDIPYPFGVGVQPGTSRNCFLDETFQLTCDKSTLFLKDLPVSNIFLQEGQIDISMHISRVCFDRSGVVLDQSISNFYTGGAFTISSGKNTIISLGCDTLSFAYFPDHNLSYSGGCVTLCDTPPPKETNPNTCSGSGCCQVNNIPIGKKNYSLAVSTFNNHTKVLAFNNCSYSFLAKQGWFNFSLDYLHYFPFDMAPFSLDWTISNSTYACKSNSYCMDSKVGAGFNCKCKLGFEGNPYHPDGCHDVDECSRPNNCSIPKQCYNFVGGYSCSCPPHYKGDGYTNGTGCTKDHRRSMYKWVVIIIALGCSVGLLVVIAVVLSVGWADKQKSLKDLRKRNFEQNGGCVLLGQLSQKEGYTERTKIFKEVQLINATNNFHQSRVIGTGGQCIVYKGILPNNTPVAIKKAKVGDDPRQIRDFISEVAVLSQINHKNVVRLLGCCLETKIPLLVYEFVDNGTLLDHINPTKTTSPISWEARLKIATETAEAISYLHSVTSIPIVHRDIKFANILLDCNYKAKVSDFGASRLVPLDNSDVCTVVQGTFGYLDPEYLHTGQLNEKSDVYSFGVVLMELLTASKVVEFNRQGKVNLATHFESSMKANRLREILDKWVLDEKNGEEMEEVALLAMRCISVKREERPTMKEVAKELDLIANKAR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00314 687 SUPERFAMILY Protein kinase-like (PK-like) 393 679 IPR011009 -
Accr4g00314 687 ProSitePatterns Calcium-binding EGF-like domain signature. 279 304 IPR018097 GO:0005509
Accr4g00314 687 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 295 306 IPR000152 -
Accr4g00314 687 SMART egfca_6 279 322 IPR001881 GO:0005509
Accr4g00314 687 Gene3D Phosphorylase Kinase; domain 1 382 485 - -
Accr4g00314 687 ProSiteProfiles Protein kinase domain profile. 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00314 687 Pfam Protein kinase domain 409 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00314 687 FunFam Fibrillin 2 274 317 - -
Accr4g00314 687 FunFam Protein kinase superfamily protein 444 489 - -
Accr4g00314 687 ProSiteProfiles EGF-like domain profile. 279 316 IPR000742 -
Accr4g00314 687 FunFam Wall-associated receptor kinase 2 486 687 - -
Accr4g00314 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Accr4g00314 687 Pfam Wall-associated receptor kinase galacturonan-binding 28 87 IPR025287 GO:0030247
Accr4g00314 687 Gene3D Laminin 236 321 - -
Accr4g00314 687 CDD EGF_CA 279 313 - -
Accr4g00314 687 SMART serkin_6 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00314 687 CDD STKc_IRAK 415 682 - -
Accr4g00314 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 682 IPR045274 GO:0007166
Accr4g00314 687 Gene3D Transferase(Phosphotransferase) domain 1 486 687 - -
Accr4g00314 687 SUPERFAMILY EGF/Laminin 279 314 - -
Accr4g00314 687 Pfam Calcium-binding EGF domain 279 314 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00314 Accr-Chr4 3054230 3056540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00314 6 686 Receptor kinase-like Gene Family AT1G21230 43.447 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g00314 Pkinase 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00314 - - pcin:129293718 792.727