Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00313 ATGTACGTACGTGAGACGATGGCTGATCTAAAGATGATGTTGTTCATTCTATTATTTGCTGCAGCCATGGCGGCAAGTGAAGCTCAATCCCTCGCAGGCTGTCTCAACAAATGCGGTGACGTGGACATTCCGTATCCATTTGGTGTGGGAGTTCAACCTGGTACTTCTCGCAACTGTTTCTTGGACGAAACATTCCAGCTCACCTGCGACAAGTCCACATTATTCCTCAAAGACCTCCCAGTTTCTAACATATTCCTCCAAGAGGGTCAAATCGACATTTCCATGCATATCTCCAGGGTCTGTTTCGATCGCTCAGGAGTAGTTCTAGACCAATCTATTTCCAATTTTTACACCGGTGGTGCTTTCACCATTTCCAGCGGCAAAAACACGATCATAAGTCTTGGTTGCGACACTTTGAGCTTTGCCTATTTCCCGGACCACAATCTTAGCTATTCAGGTGGCTGCGTAACGCTGTGCGATACGCCGCCTCCAAAGGAAACCAACCCCAACACATGTTCGGGGTCAGGGTGTTGCCAGGTCAATAATATTCCCATTGGAAAGAAAAACTACTCGTTGGCAGTATCCACCTTCAACAACCATACAAAAGTGTTGGCCTTCAACAACTGCAGCTATTCTTTTCTCGCCAAACAGGGCTGGTTTAATTTCTCTCTTGATTATCTACACTACTTTCCCTTTGATATGGCCCCCTTCTCCCTAGATTGGACTATTTCCAATAGTACCTATGCCTGCAAATCCAACTCCTATTGCATGGATTCTAAGGTTGGAGCTGGCTTCAATTGCAAATGCAAACTTGGCTTTGAGGGGAATCCATATCATCCCGATGGATGTCACGATGTTGATGAGTGTAGCAGACCCAACAACTGCAGTATCCCAAAGCAATGCTACAACTTCGTCGGTGGTTACAGCTGTTCTTGTCCACCTCATTATAAGGGCGACGGCTACACTAATGGGACGGGCTGTACAAAGGACCATCGTCGATCTATGTATAAATGGGTTGTCATTATAATTGCTTTGGGTTGTAGTGTGGGCTTACTGGTTGTCATCGCAGTTGTCTTATCAGTGGGTTGGGCAGACAAGCAAAAATCGTTGAAAGATCTCAGAAAAAGAAATTTTGAGCAGAACGGAGGATGCGTGCTGCTTGGACAACTTTCACAAAAAGAAGGATACACTGAGAGAACAAAAATATTCAAAGAAGTTCAACTTATAAATGCCACAAACAACTTTCATCAGAGTAGAGTAATTGGTACTGGGGGACAATGCATAGTCTATAAGGGTATATTGCCTAACAATACTCCCGTTGCAATTAAAAAGGCTAAAGTAGGAGATGATCCTAGACAAATTAGGGATTTCATTAGTGAAGTAGCCGTGCTTTCCCAAATCAACCACAAAAATGTTGTTAGACTTTTGGGATGTTGCCTGGAAACAAAAATTCCTTTATTAGTCTATGAATTTGTGGACAATGGCACACTTCTTGACCACATAAATCCTACAAAGACTACATCTCCTATTTCATGGGAGGCTCGATTAAAGATAGCTACAGAAACTGCCGAGGCAATTTCATATTTGCACTCTGTCACTTCAATTCCCATTGTCCATCGGGATATCAAGTTTGCTAATATACTTTTAGACTGTAATTACAAAGCAAAGGTGTCTGACTTTGGAGCTTCAAGACTCGTTCCTCTGGACAATTCTGATGTTTGCACGGTGGTGCAAGGTACTTTTGGGTACTTGGATCCAGAATACCTCCACACAGGTCAACTGAATGAAAAAAGTGATGTTTATAGTTTTGGAGTTGTCCTCATGGAATTGCTCACCGCAAGTAAAGTAGTTGAATTCAATAGACAAGGAAAAGTGAATCTGGCGACGCATTTTGAGTCTTCAATGAAAGCAAACCGTCTGCGGGAAATTCTTGATAAATGGGTGTTAGATGAAAAGAATGGAGAGGAGATGGAAGAAGTGGCTTTATTAGCAATGAGGTGTATTAGCGTAAAAAGAGAGGAAAGGCCAACGATGAAAGAAGTAGCAAAAGAGCTAGATTTGATTGCAAATAAAGCGCGATGA 2082 0.426 MYVRETMADLKMMLFILLFAAAMAASEAQSLAGCLNKCGDVDIPYPFGVGVQPGTSRNCFLDETFQLTCDKSTLFLKDLPVSNIFLQEGQIDISMHISRVCFDRSGVVLDQSISNFYTGGAFTISSGKNTIISLGCDTLSFAYFPDHNLSYSGGCVTLCDTPPPKETNPNTCSGSGCCQVNNIPIGKKNYSLAVSTFNNHTKVLAFNNCSYSFLAKQGWFNFSLDYLHYFPFDMAPFSLDWTISNSTYACKSNSYCMDSKVGAGFNCKCKLGFEGNPYHPDGCHDVDECSRPNNCSIPKQCYNFVGGYSCSCPPHYKGDGYTNGTGCTKDHRRSMYKWVVIIIALGCSVGLLVVIAVVLSVGWADKQKSLKDLRKRNFEQNGGCVLLGQLSQKEGYTERTKIFKEVQLINATNNFHQSRVIGTGGQCIVYKGILPNNTPVAIKKAKVGDDPRQIRDFISEVAVLSQINHKNVVRLLGCCLETKIPLLVYEFVDNGTLLDHINPTKTTSPISWEARLKIATETAEAISYLHSVTSIPIVHRDIKFANILLDCNYKAKVSDFGASRLVPLDNSDVCTVVQGTFGYLDPEYLHTGQLNEKSDVYSFGVVLMELLTASKVVEFNRQGKVNLATHFESSMKANRLREILDKWVLDEKNGEEMEEVALLAMRCISVKREERPTMKEVAKELDLIANKAR 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00313 693 Gene3D Transferase(Phosphotransferase) domain 1 492 693 - -
Accr4g00313 693 Pfam Wall-associated receptor kinase galacturonan-binding 34 93 IPR025287 GO:0030247
Accr4g00313 693 SMART serkin_6 415 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00313 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Accr4g00313 693 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Accr4g00313 693 Gene3D Laminin 242 327 - -
Accr4g00313 693 Pfam Protein kinase domain 415 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00313 693 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 688 IPR045274 GO:0007166
Accr4g00313 693 ProSitePatterns Calcium-binding EGF-like domain signature. 285 310 IPR018097 GO:0005509
Accr4g00313 693 FunFam Protein kinase superfamily protein 450 495 - -
Accr4g00313 693 SUPERFAMILY EGF/Laminin 285 320 - -
Accr4g00313 693 FunFam Fibrillin 2 280 323 - -
Accr4g00313 693 SMART egfca_6 285 328 IPR001881 GO:0005509
Accr4g00313 693 Pfam Calcium-binding EGF domain 285 320 IPR001881 GO:0005509
Accr4g00313 693 FunFam Wall-associated receptor kinase 2 492 693 - -
Accr4g00313 693 SUPERFAMILY Protein kinase-like (PK-like) 399 685 IPR011009 -
Accr4g00313 693 CDD EGF_CA 285 319 - -
Accr4g00313 693 Gene3D Phosphorylase Kinase; domain 1 388 491 - -
Accr4g00313 693 CDD STKc_IRAK 421 688 - -
Accr4g00313 693 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
Accr4g00313 693 ProSiteProfiles Protein kinase domain profile. 415 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00313 Accr-Chr4 3054230 3056558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00313 12 692 Receptor kinase-like Gene Family AT1G21230 43.447 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g00313 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00313 - - pcin:129293718 792.727