Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00305 ATGGATGGCCGTCCTCCAACGTCTTATGTCATCCTTGCATGTGATGCCACCAAAGATATCAGTGAGCATGAGATCAAGTCCATTCTTGATCACGTACGGAGTACCAGTGGCATTTTATATGCAGGTTCCAAATTGCTAGTGCTCGGCGTCTTGCATAAAGTGCTACACCCCATGGGGTACCAGACATTACCATGCCCTGAGTCTTTTGCTGGCACAAATTTTCGTGCACTGGATGAAGCAGTTGCCAAGAAACTTGATTCATATACAAATATGCTTTTGCCGATGTATGAAGATTGGGAAAATTCCGCGATCAGCATCGAAGTCAAAGTCACTGCAGGTTTTCCAATCAAACAGGTTATAATGCAAGAGGTTGCATGCTATAATGCAGCTTGGATTGTATTTGATAGGCACCTTCGACGGGACACAAAATACCTTCATAAGATACCAAGCAAGGTTGCATTGGTTAAAGACGACTTGTTTTTGGATATCTGGAGATCTATGATATCACCTGAAACAGTAGATGTCACGGAAAGCAAGCTTGCTTATTCTTTGTCTAAATTTGTTTCTCTATCGGATTGTCAAAGTGTTGCAGACATTGTGCATTCTATTTCCTCTTCCAAAACCTATCCCTCCCCCATGGTTTCTTCTGACAACACAAAGCACTCATTTGCATCACGCGAACAATTCTTCCCAACAGATCCTGGGTCGTCTTCTATATCAGGCCCCCTTACTTCTCAGATTGTCCAAAGGCAAAACAAGTATGGATTTATAAAAAAATCTTCAGATGCACCAATTCTTTGTGCTGGTTGTGGGATTAGGACTGAATTGCATGCTAAGGAGTCGATGAGGTTCAGCTATTCTGATATACAGAATGCAACAAATGATTTTTCAAAGGATAACTTATTGGGTGAAGGTGGTTATGGTCACGTGTACAAGGGTGTTCTTAGAGATGGACAGCAAATTGCTGCAAAGGTAAGAAAACAAGAAAGTGGCCAGGGTTTTTCTGAATTTCATTCCGAGGTTTATGTCTTAAGTTTTGCTCGGCACAAGAATATGGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATACATTTGCAACAAGTCACTTGACTGGCATTTATTCGATAAAGATGCTGCAGTTCTTGAGTGGCCTCGAAGATATGCTATTGCCATTGGAACTGCAAAAGGGTTGCGCTTTCTCCATGAAGAATGCCGTGGGGCCCCCATTATTCATCGAGATATGCGACCTAGCAATATACTTCTTACTCATGATTTTGTTCCCATGCTTGGTGACTTTGGCCTCGCCAAATGGAAGACTGGTAGCGATGAGACTATGCAAACAAGGATAGTGGGCACATCAGGATACCTTGCTCCTGAGTATGCTGAAGATGGCGTTGTTTCTGTGAGGACAGATGTGTACGCCTATGGCGTTGTTCTGTTACAATTAATATCAGGGCGCAAGGTGGGCGTGTCCAGTAGTAAACCTGAGCAGCCATCCCTCCGTCAATGGGCTGAGCCATTGATTGAGAAGTTGGCTTTACTAGAACTCATTGACCCACGTCTTGGGGAGTCATATGACACATATGAACTTTACCTTATGGCAAAAGCTGCGTACTTCTGTGTGCAAAGAAGGCCTGAGATGCGACCATCAATGGCTGAGGTGGTTCGCCTTTTTGAAGGACAAAATGATCATTTCCATGCCATGGCAGATCATTTCATGCCTAATTACCATCAAGGGAGAGAAGGTTTGTATCCAAAGAAGGAGGCTGAAAGTGAAGAAGATGTTGACTTTTAA 1818 0.4301 MDGRPPTSYVILACDATKDISEHEIKSILDHVRSTSGILYAGSKLLVLGVLHKVLHPMGYQTLPCPESFAGTNFRALDEAVAKKLDSYTNMLLPMYEDWENSAISIEVKVTAGFPIKQVIMQEVACYNAAWIVFDRHLRRDTKYLHKIPSKVALVKDDLFLDIWRSMISPETVDVTESKLAYSLSKFVSLSDCQSVADIVHSISSSKTYPSPMVSSDNTKHSFASREQFFPTDPGSSSISGPLTSQIVQRQNKYGFIKKSSDAPILCAGCGIRTELHAKESMRFSYSDIQNATNDFSKDNLLGEGGYGHVYKGVLRDGQQIAAKVRKQESGQGFSEFHSEVYVLSFARHKNMVMLLGYCCKERQNILVYEYICNKSLDWHLFDKDAAVLEWPRRYAIAIGTAKGLRFLHEECRGAPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGSDETMQTRIVGTSGYLAPEYAEDGVVSVRTDVYAYGVVLLQLISGRKVGVSSSKPEQPSLRQWAEPLIEKLALLELIDPRLGESYDTYELYLMAKAAYFCVQRRPEMRPSMAEVVRLFEGQNDHFHAMADHFMPNYHQGREGLYPKKEAESEEDVDF 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00305 605 ProSiteProfiles Protein kinase domain profile. 296 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00305 605 SUPERFAMILY Protein kinase-like (PK-like) 280 573 IPR011009 -
Accr4g00305 605 Gene3D Phosphorylase Kinase; domain 1 269 371 - -
Accr4g00305 605 ProSitePatterns Tyrosine protein kinases specific active-site signature. 417 429 IPR008266 GO:0004672|GO:0006468
Accr4g00305 605 CDD STKc_IRAK 302 568 - -
Accr4g00305 605 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 268 371 - -
Accr4g00305 605 Pfam Protein kinase domain 297 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00305 605 PANTHER OS01G0750732 PROTEIN 180 573 - -
Accr4g00305 605 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Accr4g00305 605 FunFam Lectin-domain containing receptor kinase A4.3 372 586 - -
Accr4g00305 605 Gene3D Transferase(Phosphotransferase) domain 1 373 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00305 Accr-Chr4 2970334 2973792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00305 284 571 Trihelix Transcription Factor Family AT1G70460 46.075 3.90e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr4g00305 Pkinase 6.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00305 - - vun:114163670 825.083