Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00300 ATGTCACTAGTTAGATCTGCTGAGCTGGCTGCTACACCCTATAAAAATGCTAAGCTCTATTCCCTAAACGGGACTGACGCTAAGCCATCCCAAAGTTTTGATCCTGATAAACAGAGAAGTATGTACATGACAGATTCTTGCTCCTGTGAGAGTTATGAAAAGTACTTCCATGATTCACCATCTGAAGAACTGATACAACCATCGAGTTCTGGGGTTTCAAGCAATTCATTTCGCCCGGATGATGCTTCTCCTTACCAGCCTATGGCTAGTTCAGGAGCTTCTATGGTTACTAATAACCCATTTGATACTTCTTTCATGTCCACGAGGCGTCATGATGCCTATTATCAACCCAATTTTGGATCAGATTTCTCAGAAAATGAAAGCCTGGATGCCCTTGACTTTAATGGTCAAATGAGATTAAAACTGCAAGAATTAGAGAGGGCCCTGCTTGATGATGAGGAAGACATATTTGAGACTGCTCAAAGCATGGAAATTGACCCTGAGTGGGTTGATCCCATTCAGAACATGCAGCTCCATGACTCACCAAAGGAGTCTTCATCCTCAGATTCTAACCTTAGCAGCATCAGTAGCAACAAAGAAGTATCACATATCTCTTCTCAGACCCCCAGGCAACTGCTTCTTGAATGTGCAGGTGTTCTTTCAGAAGGAAATTTAAAGGAGGCATCAGATATGATAAATAATCTCCGAAAGATGGTCTCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCTTGGCTGAGTCCGGCAAGTGTATTTACAAAGCTCTGAAATGCAAGGAGCCTCCTTCTTCAGATCGTCTGGCAGCAATGCAGATATTATTTGAAGTGTGCCCATGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGATGAAACCAAGGTGCACATAGTCGACTTTGACATCAACCAAGGAAGCCAATACATAACACTACTACAAACACTTGCTAAAAGGCCAGGCAAGCCACCCCACGTGAGATTGACTGGAGTTGATGATCCAGAATCTGTACAACGATCTGTTGGAGGCCTAAAGATCATAGGACAAAGGCTTGAGAATCTAGCAGAAGCACTGAAGCTGCCATTCGAGTTTCGACCCGTGTCATCAAGGACATCCCTTGTCACACCTTCAATGCTCAAATGTCGCCCTGGGGAAGCACTTGTGGTGAACTTTGCATTTCAGCTGCACCATATGCCAGATGAGAGTGTTTCCACGGTGAACGAGAGAGATCAACTCCTTCGCATGGTTAAGAGCCTAAATCCAAAAGTAGTAACAGTTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTCCCAAGATTCGTAGAGGCTTACAATTATTACTCTGCTATTTTTGAGTCGCTTGATGCAACTCTTCCCAGAGAGAGTCAGGACAGGATCAATGTTGAGAGGCAATGCTTAGCAAGGGACATTGTCAACATTGTTGCATGTGATGGTGAGGATCGGATCGAAAGGTATGAAGTTGCAGGGAAATGGAGGGCAAGGATGGCAATGGCTGGATTCACTTCATACCCAGTGAGCAGTCACGTGACTGACTCAATTCGGAAACTCATCGGGCAGTATTGTGACATGTACAAGATGAAGGAGGAAATGGGTGCACTTCATTTTGGGTGGCTAGACAAGAACTTGATTGTAGCTTCGGCGTGGAGGTGA 1740 0.4443 MSLVRSAELAATPYKNAKLYSLNGTDAKPSQSFDPDKQRSMYMTDSCSCESYEKYFHDSPSEELIQPSSSGVSSNSFRPDDASPYQPMASSGASMVTNNPFDTSFMSTRRHDAYYQPNFGSDFSENESLDALDFNGQMRLKLQELERALLDDEEDIFETAQSMEIDPEWVDPIQNMQLHDSPKESSSSDSNLSSISSNKEVSHISSQTPRQLLLECAGVLSEGNLKEASDMINNLRKMVSIQGDPPQRIAAYMVEGLAARLAESGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDETKVHIVDFDINQGSQYITLLQTLAKRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLENLAEALKLPFEFRPVSSRTSLVTPSMLKCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKVVTVVEQDVNTNTTPFFPRFVEAYNYYSAIFESLDATLPRESQDRINVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSYPVSSHVTDSIRKLIGQYCDMYKMKEEMGALHFGWLDKNLIVASAWR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00300 579 MobiDBLite consensus disorder prediction 62 96 - -
Accr4g00300 579 Coils Coil 135 155 - -
Accr4g00300 579 Pfam GRAS domain family 210 579 IPR005202 -
Accr4g00300 579 MobiDBLite consensus disorder prediction 58 96 - -
Accr4g00300 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
Accr4g00300 579 MobiDBLite consensus disorder prediction 178 206 - -
Accr4g00300 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 186 574 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00300 Accr-Chr4 2907670 2909409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00300 1 579 GRAS Transcription Factor Family AT1G21450 62.818 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr4g00300 GRAS 5e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00300 - - pcin:129294210 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00256 3 2695017 2696753 Accr4g00300 4 2907670 2909409 CCT
Accr4g00300 4 2907670 2909409 Accr4g00300 4 2907670 2909409 ECH