Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00299 ATGCCACGTAAAAGTGAGGGCGTCTCTGGCGACGATGATGACTCCACTATTGATAAGCAATGCAGCACTTACTTCGATGTCTATGGCCCTCAAAGCAAGGCCGATGTTATTTTCAAGACACCCGAAGCTAATTCAACTTTGAATCTTCAGGACATTCAAGGACTGGTAACTTGGGTTCTTGCTGAAGGATTTATGCCGTCATGGGTTTTCATTAAGAACAAACCTCTTATCCAAAAAGTGGTTATGCTCTATACGCCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAAAGTGCTCCCCTTTTTAAAAAAAATCTGTGGCAATCCAAGGGCTGTCTTGGCTCTCAGCTGTGTTTCAGACGGAATGCAAACCATAGATGCCCTCCTAACGTGCAAGCTGAAAAGAAAGAGGGATGAAAGTAGTAGTTTAGTTATGGAGAAATCGGCCCTCATATCTCAGCAAGAAAAAAGCAGTGGTGTTACGGATAATGTATCATTTATGGAGCTTACAAAAGGCATTCCTCTCCCTGTTACATATTATACTCTTACAGAGAAGGAATTAGAAGACAATGGATATTTATTTAAACAGCCAGGTTTTCTTTCTACTTTACCTGCTCCTTTGGGATCTTCTCCCTGTGAAATGCTGGCACTTGACTGTGAGATGTGCATCACAAAGGAAGGTTTTGAACTTACAAGAATTACTCTAGTGGATTTTAATGGACAGGTCATGCTTGATAAATTGGTTAAGCCATCAAATGCTATCATTGATTACAATACCAGGTATAGTGGTATAACACCTGAGATGTTAAATGGGGTCACCACAAATCTGAAAGACATTCAGGATGAATTTCTAAAGCTGGTTTACCAAGAGACTATTCTGGTTGGGCATTCTTTGGAAAATGATTTGTTAGCTCTGAAGATCTCTCATGATTTGGTAATTGATACAGCAGTATTATACAAATACCGACGAGGCGCATCTCATAAAACTGCTCTGCGGATTCTTGCCAAGAAATTTCTCTCTCGGGAAATACAGCAATCAGGGAACGGACATGACAGCATTGAAGATGCTAGAGCTGCAATGGAATTGGCACTGTTAAAGATCAGACAAGGACCTGACTTTGGTTCTCCCCCATCTTTCATGCGGAAAAAGCTCTCTTCTATTTTGAGCGAGTCTGGCAAAACTTCCTCTTTGGTTGATAATATATCTGTAGTAAAACGATATGCTTCTGAGTCCTCCAATGCAATTCCAGTGGCTTCTGATGATGAAGCACTCGCAAGGATTACCAAGGAGGTGAAAAATGACAAGATAAATTTTGTCTGGACACAGTTTTCAGAATTACATTCATACTTGAAGAAGCAGGCTGAGGATTCGGAGATCTTGAATAAAAGACTTGCAGAGATGATTTCATTGCTTACTTGTAAGAAGAATTCTGCTAAAGGGAAAGACATCAAGCTGAGAGCAACTTCTGAATTGAAGGAAATTCTAAGTCGCATGGATTCCAGAATTGAAGCTCTGTACAAGTCATTGCCATCTAATGCTATGTTGATTATTTGCACCGGTCATGGAGACACAGCAATTGTGCACAGACTGAGGAGAATGCTTTCAGAGCAGAACGAAACCACCATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCTCGAGCTGAGGTTGCCTTGTGTTTTTTAGGTGTGAAGCATTGA 1713 0.4104 MPRKSEGVSGDDDDSTIDKQCSTYFDVYGPQSKADVIFKTPEANSTLNLQDIQGLVTWVLAEGFMPSWVFIKNKPLIQKVVMLYTPGLDAALYLSQSKVLPFLKKICGNPRAVLALSCVSDGMQTIDALLTCKLKRKRDESSSLVMEKSALISQQEKSSGVTDNVSFMELTKGIPLPVTYYTLTEKELEDNGYLFKQPGFLSTLPAPLGSSPCEMLALDCEMCITKEGFELTRITLVDFNGQVMLDKLVKPSNAIIDYNTRYSGITPEMLNGVTTNLKDIQDEFLKLVYQETILVGHSLENDLLALKISHDLVIDTAVLYKYRRGASHKTALRILAKKFLSREIQQSGNGHDSIEDARAAMELALLKIRQGPDFGSPPSFMRKKLSSILSESGKTSSLVDNISVVKRYASESSNAIPVASDDEALARITKEVKNDKINFVWTQFSELHSYLKKQAEDSEILNKRLAEMISLLTCKKNSAKGKDIKLRATSELKEILSRMDSRIEALYKSLPSNAMLIICTGHGDTAIVHRLRRMLSEQNETTICREKIVEILEEVQARAEVALCFLGVKH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00299 570 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 42 390 IPR047021 GO:0004527
Accr4g00299 570 SUPERFAMILY Ribonuclease H-like 215 368 IPR012337 -
Accr4g00299 570 FunFam RNA exonuclease NEF-sp 211 375 - -
Accr4g00299 570 CDD REX1_like 216 365 IPR034922 -
Accr4g00299 570 Gene3D - 213 373 IPR036397 GO:0003676
Accr4g00299 570 SMART exoiiiendus 214 373 IPR013520 -
Accr4g00299 570 Pfam Exonuclease 217 363 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00299 Accr-Chr4 2899882 2905962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00299 215 363 C2H2 Transcription Factor Family AT3G27970 26.347 3.89e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00299 K14570 - qsa:O6P43_019835 874.774