Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00273 ATGGGAAACAGACTGGAATTGTTGTTCTTGTTCTCAACGGCCTTCACGATCAGAGCAATGTTCTTTCGCGTTGGAGCCCAGCCGGTAGAAGATAAGCAAGCCTTGCTTGACTTCCTTCACAACATAAACCACTCTCATGCTCTAAACTGGAATGATGAGAAATCTTCTGTATGCAAAAGCTGGAGAGGAATCACCTGCGATAGAGACCATTCCAGAGTCGTAGGCCTTCATTTACCTGCAGTTGGATTGAGAGGCCCAATACCACCGAACACCTTAAGTCGCCTCTCAGCACTTCAGACTGTGAATCTAACATCCAATAGCCTAACGGGTCCTTTTCCTTCTGGTTTCTCTGAGCTTAAGAGTTTAACCTATCTTAACATTCAGTTCAACGAGTTGTCTGGCCCATTACCATCAGATTTCTCGGTTTGGAAGAATTTGACTGTTGCTGATTTATCCAACAATTTTTTTAATGGGAGCATTCCTTCATCGATATCGAGTCTGATTCATCTCACATCTTTAGTCCTGGAAAATAACTCGCTTTCCGGTGAAATTCCTGACATCAATATTCCTACCCTGCAAGAGCTGAATCTGGCCAACAATAACCTTAGTGGGATGGTGCCCAAATCCCTTCTGACATTCCCAAGTTGGGCGTTTTCAGGGAACAATCTTTCATTGGCAAATGCTCAACCAAGAAGGAAAACCTCAAAAAGACTTGGTAAGTCTGCATTAATAGGTGTCATTCTAGGTTGTAGTGGGCTTGCATTTGGTGTTATTGCAGCTTTCTTGCTTTTGTGCTACTACGATAAAGGAGGTGAAAATGGGCTAATAACAATGAAATCCCAGAAAAAAGACATGTTTCTGAAAAAGGATATATGTGAGAGTCATTACAGAAAAAACAAGATTGAGTTCTTTGAGGATTGCAATTTCGCATTTGACCTGGAGGATCTGTTGAGAGCATCAGCTGAGGTGCTTGGTAAGGGAACGTATGGCACAACATATAAGGCAAATATAGAGGACGCTACCACTGTGGTGGTGAAGAGATTGAAAGAAGTCATCATCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTTGTTGGGAGAATTAGGCACGACAATGTGGCAGCTCTCAGGGCATATTACTATTCCAAGGAGGAGAAACTCATGATCTATGATTACTATGAACAAAGTAGCGTTTCTACTATGTTGCATGGCAGAAGAGGGGAAGAAAGGATTTCATTAGACTGGGATAGCAGGCTGAGGATTGCAATAGGTGCAGCAAGAGGCATTGCTCACGTGCATGCTCAACAAGGAGGAAAACTTGTCCACGGAAACATAAAAGCCTCCAACATCTTCCTCAACTCGGCAGGTTATGGCTGCATATCTGACATTGGTTTAGCAACACTGATGAGTCCAATAGGGCCACCGTCACTAAGGACTGCTGGCTACCGTGCTCCAGAAGTAACAGACCCCAAAAAAGCAAACCACACATCTGATGTCTACAGCTTTGGGGTGTTCTTGTTGGAGCTTTTGACCGGAAAAGGCCCCATGCACGCCACTGCAAGTGAGGAGGCCGTCCACTTGGTCAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCTGAAGTATTTGATGCACATTTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTACAAATGTTACAACTTGCGATGGCATGTGTTGCTAGAGTTCCAGAGCAGAGACCAAAAATGCGAGATGTTCTAAGAATGATGGAGGATATTCTTCGACCAAACACTGAGAATCGACCGTCATCTGAATCCAGATCAGCAGCTTCTACACCGACACCACCAGCCATTGACGTACCTTCTTCCTCTGTGGATGCTTAG 1872 0.4428 MGNRLELLFLFSTAFTIRAMFFRVGAQPVEDKQALLDFLHNINHSHALNWNDEKSSVCKSWRGITCDRDHSRVVGLHLPAVGLRGPIPPNTLSRLSALQTVNLTSNSLTGPFPSGFSELKSLTYLNIQFNELSGPLPSDFSVWKNLTVADLSNNFFNGSIPSSISSLIHLTSLVLENNSLSGEIPDINIPTLQELNLANNNLSGMVPKSLLTFPSWAFSGNNLSLANAQPRRKTSKRLGKSALIGVILGCSGLAFGVIAAFLLLCYYDKGGENGLITMKSQKKDMFLKKDICESHYRKNKIEFFEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANIEDATTVVVKRLKEVIIGKREFEQQMEVVGRIRHDNVAALRAYYYSKEEKLMIYDYYEQSSVSTMLHGRRGEERISLDWDSRLRIAIGAARGIAHVHAQQGGKLVHGNIKASNIFLNSAGYGCISDIGLATLMSPIGPPSLRTAGYRAPEVTDPKKANHTSDVYSFGVFLLELLTGKGPMHATASEEAVHLVRWVNSVVREEWTAEVFDAHLLRFPNIEEEMVQMLQLAMACVARVPEQRPKMRDVLRMMEDILRPNTENRPSSESRSAASTPTPPAIDVPSSSVDA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00273 623 Gene3D Phosphorylase Kinase; domain 1 285 392 - -
Accr4g00273 623 ProSiteProfiles Protein kinase domain profile. 318 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00273 623 ProSiteProfiles Leucine-rich repeat profile. 191 212 IPR001611 GO:0005515
Accr4g00273 623 ProSitePatterns Protein kinases ATP-binding region signature. 324 355 IPR017441 GO:0005524
Accr4g00273 623 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 393 600 - -
Accr4g00273 623 MobiDBLite consensus disorder prediction 591 623 - -
Accr4g00273 623 FunFam Probable inactive receptor kinase RLK902 28 188 - -
Accr4g00273 623 Gene3D Ribonuclease Inhibitor 29 234 IPR032675 -
Accr4g00273 623 FunFam pollen receptor-like kinase 1 288 392 - -
Accr4g00273 623 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Accr4g00273 623 SUPERFAMILY Protein kinase-like (PK-like) 322 601 IPR011009 -
Accr4g00273 623 PANTHER OS05G0588300 PROTEIN 14 601 - -
Accr4g00273 623 MobiDBLite consensus disorder prediction 593 623 - -
Accr4g00273 623 Pfam Leucine rich repeat 87 132 IPR001611 GO:0005515
Accr4g00273 623 Gene3D Transferase(Phosphotransferase) domain 1 394 608 - -
Accr4g00273 623 Pfam Protein kinase domain 321 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00273 623 SUPERFAMILY L domain-like 30 213 - -
Accr4g00273 623 Pfam Leucine Rich Repeat 192 218 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00273 Accr-Chr4 2737358 2739790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00273 20 614 Receptor kinase-like Gene Family AT4G23740 53.130 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr4g00273 Pkinase 5.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00273 - - aprc:113851984 852.432