Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00271 ATGGAGCAGAGCATCCTATGCAAATACTCAGTGCATCACAGCGTTACCAAGAAGCTCGCAAGGCCCAAGGCCTCCGATACCAGCAATCCGATAGATCCCCGAGTCTTACGGATATCCGTAACCGATCCGGACGCCACAGACTCCTCCAGCGACGAGGAAGGGGAGTTCCTGAGTCGACCCAGAGTGAAGCGGTATGTGAACCAGATTGACATCGAAACTTGCGCGAGAAACGGAGCCCTACACAACAATGCCCGGAAGAGGCCCGCCGGAACCACCGCGACTTGCCGGCGGCCGGCAAAGGCTTCCGTGGCGAATAACGGCAGGAAGTTCCGAGGTGTACGGCAAAGACCATGGGGGAAATGGGCTGCAGAGATTCGAGATCCAGCAAGACGAGTACGGCTCTGGTTGGGGACCTATGATACAGCAGAGGAAGCGGCCATGGTGTACGATAATGCGGCGATTAAGCTGCGAGGTCCCGATGCTATGACGAACTTTGCAACGCCACCGGCAAGGGAAAAGGTCGAAGAAGTAGAAGTAGAAGTGACCGAGAAGCCGGAAATGAAAGTTTCAGTACAGTCAGAAGCATCCGGTTCGGGCTACGATTCGGGAGAGGAGTCTCGTAATCTTTCGTCTCCGACATCGGTGCTTCAGTTTAGAAGCAATTCGAGCGAGGAAGCAGAGCCGGAAAAAGCGACGGAAGCATGCGGAACAGGGACAGAAAGAGAAGAAACTGGGGAAAAGCCATTTGGCGAGTGCGAAGGGGAAACAAGTCAGAGGAGATTGTGGGAGGAGGAGGAGTACTGGAGGATAGAGATGCCGGTGTGGGATGATGTGTTGATGACTTTTGAAACGCCAGAATACTCGCCGGTGATGTGGGAAGAACCGTCGACGTTGTACTGTGAAACGACGACGAGGACGACGGCGGAGGAGATTGGAAGCGTGGGGGAGACAGATTGGGAGACAATGTACTCGCCGTCAGAGATGTGCCAGGTGGACGATTACTTTCGAGACATACTGTTAGGGTCAGATCCTCTGGTGACGCTCTGA 1047 0.5444 MEQSILCKYSVHHSVTKKLARPKASDTSNPIDPRVLRISVTDPDATDSSSDEEGEFLSRPRVKRYVNQIDIETCARNGALHNNARKRPAGTTATCRRPAKASVANNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDAMTNFATPPAREKVEEVEVEVTEKPEMKVSVQSEASGSGYDSGEESRNLSSPTSVLQFRSNSSEEAEPEKATEACGTGTEREETGEKPFGECEGETSQRRLWEEEEYWRIEMPVWDDVLMTFETPEYSPVMWEEPSTLYCETTTRTTAEEIGSVGETDWETMYSPSEMCQVDDYFRDILLGSDPLVTL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00271 348 FunFam Ethylene-responsive transcription factor 2 108 167 - -
Accr4g00271 348 CDD AP2 109 166 IPR001471 GO:0003700|GO:0006355
Accr4g00271 348 MobiDBLite consensus disorder prediction 189 222 - -
Accr4g00271 348 MobiDBLite consensus disorder prediction 223 257 - -
Accr4g00271 348 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Accr4g00271 348 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Accr4g00271 348 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
Accr4g00271 348 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Accr4g00271 348 MobiDBLite consensus disorder prediction 180 257 - -
Accr4g00271 348 MobiDBLite consensus disorder prediction 17 57 - -
Accr4g00271 348 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 248 - -
Accr4g00271 348 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Accr4g00271 348 SUPERFAMILY DNA-binding domain 109 166 IPR016177 GO:0003677
Accr4g00271 348 Gene3D AP2/ERF domain 108 167 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00271 Accr-Chr4 2718841 2719887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00271 7 225 AP2-EREBP Transcription Factor Family AT4G27950 48.444 1.71e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g00271 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00271 - - pcin:129303306 375.941