Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00267 ATGGATGACAGCTTTTCTGATATTCTTGAAGACAAGGAATTTGGTGGGGACGACCTCTTTGCCATTTTGGAGAGCCTTGAGGACTTTTCTGACTTTCCTCCCGTTGATGAAGTTGTTCTTAGCACTAAGGAGAATGAGGAAACTTCAAGGTTCGTGTCACAAAAATCAACTTCCTCAAGTGCTCTGCAAGAGTCTGAAGAAACTGAGCTTGAAGCTTCACCCAAAAGTAAGAGACAAAAGCGCGCACCCACCTCTTCGTCGGAGGATCCAAACCCAGATGGCCAACAAAGAATACCTCACATCACTGTTGAGCGCAACCGAAGGAAGCAAATGAACGAGCACTTGTCCGTTTTAAGGTCACTTATGCCAAACTTTTATGTCAAACGTGGGGACCAAGCATCGATAATCGGAGGAGTGGTTGATTACATAAACGAGTTGCAGCAGGTTCTACAGTCGCTGGAAGCCAAGAAGCAGAGAAAAGTATACAGTGAAGTGCTAAGCCCTAGGCTAGTGTCAAGTCCAAGGCCTTTAGCTCTGAGTCCTAGAAAACCACCAGTGAGTCCGAGGCTAAGCTTGCCCATTAGTCCCAGGACTCCACAACCAGGTAGTCCTTACAAGCCCAGGTTGCAGCAGCAAGTTTACCTCTCACCAACCATCTCCAACTCTCTCGAGCCATCTCCTACCTCTTCTGCTGCTTCCTCCTCCAATATTAACGATAACATCAATGAGCTTGTGGCCAATTCCAAGTCTGCTTTGGCACAAGTGGAGGTCAAGTTTTCTGGGCCACACGTTCTTTTGAAAACAGTGTCTCCGCGTATTCCAGGCCAAGCTTTGAAGATCATATCAGTACTTGAAGACCTTGCTCTTGAAATCCTCCATGTCAGCATCAGCACCGCCGATGAAACCATGCTTAACTCATTCACCATTAAGATTGGAATTGAATGCCAACTCAGTGCGGAAGAACTCGCTCTACAAATCCAGCAAACGTTCTGCTGA 996 0.4669 MDDSFSDILEDKEFGGDDLFAILESLEDFSDFPPVDEVVLSTKENEETSRFVSQKSTSSSALQESEETELEASPKSKRQKRAPTSSSEDPNPDGQQRIPHITVERNRRKQMNEHLSVLRSLMPNFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRLVSSPRPLALSPRKPPVSPRLSLPISPRTPQPGSPYKPRLQQQVYLSPTISNSLEPSPTSSAASSSNINDNINELVANSKSALAQVEVKFSGPHVLLKTVSPRIPGQALKIISVLEDLALEILHVSISTADETMLNSFTIKIGIECQLSAEELALQIQQTFC 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00267 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 146 IPR011598 GO:0046983
Accr4g00267 331 FunFam Transcription factor SPEECHLESS 87 161 - -
Accr4g00267 331 PANTHER TRANSCRIPTION FACTOR FAMA 15 330 IPR044283 GO:0003700|GO:0010052
Accr4g00267 331 MobiDBLite consensus disorder prediction 178 203 - -
Accr4g00267 331 MobiDBLite consensus disorder prediction 51 67 - -
Accr4g00267 331 Coils Coil 139 159 - -
Accr4g00267 331 Gene3D - 87 160 IPR036638 GO:0046983
Accr4g00267 331 SMART finulus 101 152 IPR011598 GO:0046983
Accr4g00267 331 MobiDBLite consensus disorder prediction 173 207 - -
Accr4g00267 331 MobiDBLite consensus disorder prediction 68 84 - -
Accr4g00267 331 MobiDBLite consensus disorder prediction 41 107 - -
Accr4g00267 331 Pfam Helix-loop-helix DNA-binding domain 96 147 IPR011598 GO:0046983
Accr4g00267 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 167 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00267 Accr-Chr4 2652607 2654706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00267 1 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 51.821 8.50e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr4g00267 HLH 2.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00267 K20558 - rcu:8274388 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00267 4 2652607 2654706 Accr4g00267 4 2652607 2654706 ECH