Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00261 ATGGAGTGCAACAAAGATGAGGCGTGTAGGGCCAAAGAACTAGCAGAAAGGAAATTTTCAGAAAGGGAATATGCTGGTGCAAAGAAGCTTGCTCTGAAGGCTCTAAATCTGTGTCCTACACTGGGGGGTATCTCTCAGTTTTTGACTACTCTTGATGTTTATATCTCTGCCGAGAATAGAGTAAGTGGGGAAATGGATTGGTATGGTATACTTCAAGTGGACCCCTGCGCTGATGATGAAACAGTTGGACAACATTACAGCAAGCTGGCTCTTACTCTTCACCCTGACACAAATAAGTCTTTAGGCGCTGAAGGTGCCTTTAAGCTGGTTTCAGAGGCATGGAGTATGTTATCAGATAAGGACAAGAGACAAGCATATAACCAGAACAGGAGTTTGAAAGAATTTCAACATAATGCTCCCAACCATGTCAAGTCTCAGTCAGAAGCTCCATGTTCAAATGGTTTTAATAATTTCAACAAGAATGTGACTACAGATATGAGGAATGGAAATGATAACACTCGATTACCACCCACCTCAGTCCCTCCTTCACAAAAAAAGGCTAGGACCTTCTGGACAATCTGTAACCGGTGCACGACACATTATGAATATCTCAAGATCTATTTGAATAATACCCTTATTTGTCCCACCTGTAATGAGCATTTCTTGGCTGTAGATATGCCTCCGCCTCCCAATATTTTCGAGTCAGCAAATCAGTCTTCTAGCCAACAGCTTCAGAATTCTCAACAACATGCTGCAGGGAATAATACAGGAAGAAATTATGCAGTTTCTCAAGATATAGGAGCAGGAGATTCCTCTGGCAGATTGTTTAACAACACCAGCTCTCAGTGGGCTCCTCAGTCTAAAATTGCTGAAGGTTCCTTTAATAAGGTAGAAAAGATAATGAAGAAGAGGAGGACAGATGATATTCACAATAATGGTGATCCAGGATACATGACTAATCATATGGGCATGGGACATGGGGTTGCAGGATTTGGTCATGTTTCTGAATCAGGAAAGGTTAACTGGCAAACAGAAAGGACCTCTAGGTTTTCTGGTCTTACCAGCAAGCCCCTCAGGATGAGAGAATTAGGCATGGTTGAAATACGGAACATGTTGATGCATAAGGCTCAAAGTGACCTTCGTAAGAAAGTTCAGGAATGGAGATCAATAGCTGAAGCTAAGAATACCAAGAAGCACAAACAGAACAAGAGAACCAAAAGCACATTGAATGGCAGAACACCTGATGTGGAGAAGCATGATGAGTCCGCTCTCAAGGGTAACGGGTATCTGGACAGCGATTCGATTGAGGCGGACCAAGCCTGTGTAACAATCAATGTTCCAGACTCAGATTTTCACAATTTTGACTTGGATAGAGCTGAAAGTTCTTTTGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGGATGCCTCGGTATTATGCTCGAATCTACAAGGTGATCTCATTGAAGCCATTTAAGATGCGGATCAGTTGGCTTAACTCTCGAAGCAATAGTGAACTGGGTCCGATAGATTGGGTAGGTTCGGGATTTTACAAAACTTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACCGAATCATTAAATTCATTTTCGCACAAGGTTAAGTGGACAAAAGGCACCAGAGGAATTGTTCGCATTTTTCCTGGAAAGGGGGAAGTTTGGGCTCTTTATAGAAACTGGTCTCCAGATTGGAACCAGCATACTCCAAATGAAGTGATACACAAGTATGAGATGGTAGAGGTGGTTGAAGATTTTGATGAAGATCAAGGAGTAGTAGTTGCCCCGCTTATTAAGGATGCTGGATTTAGGACCGTGTTTGATAGGCACGGAGATCCTCACGGGTTAAGGAGAATTCCTAAAGACGAGCTGTTTCGTTTCTCGCATCAGGTTCCCTACTACTTGCTTACAGGACAAGAAGCTCACAATGCCCCAAAAGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTCTCGACCTCCTGTCAAGCGACGAGGCACCTGACGGTGTTGGAAAACGTAGGGAAGACACATTGCTCAGTTCAACCGAAAAGTGTGGGCTTGAGATGCGGGAATGA 2103 0.4356 MECNKDEACRAKELAERKFSEREYAGAKKLALKALNLCPTLGGISQFLTTLDVYISAENRVSGEMDWYGILQVDPCADDETVGQHYSKLALTLHPDTNKSLGAEGAFKLVSEAWSMLSDKDKRQAYNQNRSLKEFQHNAPNHVKSQSEAPCSNGFNNFNKNVTTDMRNGNDNTRLPPTSVPPSQKKARTFWTICNRCTTHYEYLKIYLNNTLICPTCNEHFLAVDMPPPPNIFESANQSSSQQLQNSQQHAAGNNTGRNYAVSQDIGAGDSSGRLFNNTSSQWAPQSKIAEGSFNKVEKIMKKRRTDDIHNNGDPGYMTNHMGMGHGVAGFGHVSESGKVNWQTERTSRFSGLTSKPLRMRELGMVEIRNMLMHKAQSDLRKKVQEWRSIAEAKNTKKHKQNKRTKSTLNGRTPDVEKHDESALKGNGYLDSDSIEADQACVTINVPDSDFHNFDLDRAESSFEEDQVWAAYDDDDGMPRYYARIYKVISLKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVKWTKGTRGIVRIFPGKGEVWALYRNWSPDWNQHTPNEVIHKYEMVEVVEDFDEDQGVVVAPLIKDAGFRTVFDRHGDPHGLRRIPKDELFRFSHQVPYYLLTGQEAHNAPKGCRELDPAATPLDLLSSDEAPDGVGKRREDTLLSSTEKCGLEMRE 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00261 700 MobiDBLite consensus disorder prediction 675 700 - -
Accr4g00261 700 Pfam DnaJ domain 66 127 IPR001623 -
Accr4g00261 700 MobiDBLite consensus disorder prediction 393 423 - -
Accr4g00261 700 Pfam Domain of unknown function (DUF3444) 443 649 IPR024593 -
Accr4g00261 700 PANTHER BNAC03G44070D PROTEIN 1 666 - -
Accr4g00261 700 SMART dnaj_3 65 122 IPR001623 -
Accr4g00261 700 SUPERFAMILY Chaperone J-domain 59 129 IPR036869 -
Accr4g00261 700 Gene3D DnaJ domain 63 173 IPR036869 -
Accr4g00261 700 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Accr4g00261 700 MobiDBLite consensus disorder prediction 657 700 - -
Accr4g00261 700 MobiDBLite consensus disorder prediction 232 266 - -
Accr4g00261 700 PRINTS DnaJ domain signature 68 86 IPR001623 -
Accr4g00261 700 PRINTS DnaJ domain signature 102 122 IPR001623 -
Accr4g00261 700 PRINTS DnaJ domain signature 86 101 IPR001623 -
Accr4g00261 700 CDD DnaJ 66 119 IPR001623 -
Accr4g00261 700 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00261 Accr-Chr4 2608746 2610848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00261 4 238 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.801 1.20e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00261 - - gmx:100814722 912.909