Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00259 ATGAATATTCGGCAAGAGAAGTCTGTCAGTGAAAAGAAATGCCTTTCATTGGACCACAAGATGGAGATAACAGCCACTGTTCTAAGATCTTTCTGTGACATTTTTTATATAATCCACATAATGTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTTTTTGGAAGGGGTGTTTTGGTTGAAGATGCTTGGGCCATAGCCAGGAGGTACCTGTCATCATACTTTTTGATTGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTGATTTTGATTGTGATCCCAAATTTAGGAGGAGGCTTTAAATCGCTGAACACAAAGAACTTTCTAAAATTTGTTGTTTTCTTCCAATATGTACCACGGCTTTTACGTGTTGTTCCTTTATGTAAAGAAATCACAAGCACCTCTGGCATTATCACTGCAACTGCTGGGGCTGGAGCAGCAATCAATCTTTTTCTTTACATGCTTGCTAGTCATGTTTTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACTTGCTGGCAACGAGCCTGCATTAGAAATGTTAAATGTAACAAGTCGGCTCTGTATTGTAGTTCTCCAGCATCAACTGACTTTGTGAACTACTTGAACGACTCTTGCCCAATACAAGAGGCAAATACTACACTTTTTGATTTTGGAATATTTCTAGATGCGCTTCAGGCTGGTATCGTGGAGCCAGGAGATTTCCCTCAAAAGTTTTTTTACTGTTTTTGGTGGGGCCTTAGAAATCTGAGTTCTCTTGGTCAGAACCTGAAAACAAGTACATATGTTTGGGAGATCATCTTTGCTGTTTTAATCTCCATCTCTGGTTTGGTTTTATTTTCATTTCTCATCGGAAATATGCAGACATATCTACAGTCAACAACGACAAGATTGGAAGAGATGAGAGTGAAAAAAAGAGATGCAGAACAATGGATGTCTCATCGGTTGCTCCCGGATAGTCTGAGAGAGCGAATCAGACGATATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAAGAAAACTTGATCCGCAATCTTCCAAAGGATTTACGTAGGGACATTAAGCGTCATCTTTGCTTGGCTCTGCTGATGAGAGTGCCAGTGTTTGAGAAAATGGACGAACAACTGTTGGATGCCATGTGTGACCGCCTGAATCCAGTGCTTCACACAGAAGAAAGCTGCATTGTCCGGGAAGGAGATCCCGTCGACGAGATGCTCTTCATAATGAGAGGGAAGCTACTAACAGTGACAACCAATGGTGGAAGAACTGGCTTCTTTAACTCAGAGTTTCTCAAGAGTGGTGACTTCTGTGGTGAGGAGCTTCTGACGTGGGCATTAGATCCTCATTCCACATCCAACCTTCCAATCTCAACCAGGACAGTACAAACCATTGTGGAAGTTGAAGCTTTTGCTCTCAAAGCTGATGACTTGAAGTTTGTGGCATCTCAGTTCAGGCGTCTTCATAGCAAGCAGCTTCGTCACACTTTTAGGTTCTACTCACAGCAATGGCGGACATGGGCTGCGTGCTTCATACAAGCAGGGTGGCGGAGATATAGTAAGAAGAAGCTGGAAGAGTCTCTGAGGGAAGAAGAGAATAGGCTGCAAGATGCACTGGCTAAGGCTGGTGGTACCTCGGCCAGCCTTGGGGCTACAATTTACGCTTCCAGATTTGCTGCTAATACTCTCCGAGCTTTACGGCGTAATCGGTCCAGGAAAACACGGTTACCTGAGAGATTTCCTCCCATGTTGCTTCAGAAGCCTGCAGAACCTGATTTTACTGCTGAATGA 1812 0.4343 MNIRQEKSVSEKKCLSLDHKMEITATVLRSFCDIFYIIHIMFQFRTGFIAPSSRVFGRGVLVEDAWAIARRYLSSYFLIDILAVLPLPQVVILIVIPNLGGGFKSLNTKNFLKFVVFFQYVPRLLRVVPLCKEITSTSGIITATAGAGAAINLFLYMLASHVFGAFWYLFSIERETTCWQRACIRNVKCNKSALYCSSPASTDFVNYLNDSCPIQEANTTLFDFGIFLDALQAGIVEPGDFPQKFFYCFWWGLRNLSSLGQNLKTSTYVWEIIFAVLISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKKRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEENLIRNLPKDLRRDIKRHLCLALLMRVPVFEKMDEQLLDAMCDRLNPVLHTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEFLKSGDFCGEELLTWALDPHSTSNLPISTRTVQTIVEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAGWRRYSKKKLEESLREEENRLQDALAKAGGTSASLGATIYASRFAANTLRALRRNRSRKTRLPERFPPMLLQKPAEPDFTAE 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00259 603 Gene3D Jelly Rolls 374 494 IPR014710 -
Accr4g00259 603 Coils Coil 528 548 - -
Accr4g00259 603 CDD CAP_ED 376 507 IPR000595 -
Accr4g00259 603 MobiDBLite consensus disorder prediction 584 603 - -
Accr4g00259 603 Pfam Ion transport protein 21 303 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr4g00259 603 Gene3D - 11 300 - -
Accr4g00259 603 ProSiteProfiles cAMP/cGMP binding motif profile. 376 460 IPR000595 -
Accr4g00259 603 SUPERFAMILY Voltage-gated potassium channels 18 298 - -
Accr4g00259 603 Gene3D Helix hairpin bin 302 367 - -
Accr4g00259 603 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 600 - -
Accr4g00259 603 SMART cnmp_10 376 507 IPR000595 -
Accr4g00259 603 FunFam Cyclic nucleotide-gated ion channel 1 303 367 - -
Accr4g00259 603 SUPERFAMILY cAMP-binding domain-like 305 498 IPR018490 -
Accr4g00259 603 FunFam Cyclic nucleotide-gated ion channel 1 374 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00259 Accr-Chr4 2587210 2590686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00259 12 603 Ion Channels AT5G53130 81.176 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00259 K05391 - gmx:100815774 969.533