Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00258 ATGGCGGCTTCATGTATATCTACGATGCGGTATCCCAAATCTTGCTGGTTGCTGTTGCTGATCACGGTACCGCTGGAACTTACAAACATGGGGTTGTGCCGTACTGAGGAGTGCAGAGAATCAAGATGTGGACGTCATGGCCCTCCGATCAGGTTTCCGTTCCGACGTAATAACATCGATCCCGATCACTGCGGCTATCCTGGGTTTAATCTCACTTGTCATGAACATCACACATTGCTTGAGCTTCCCGCAGTTCCACTTCCGATCCAATTCAGGGTCACTGATATAGATTACAATTATCAGTCTGTGTTCATATCTGACCCAGAAAATTGCCTTCCGAAACAGCTTCTCAAGCTCAACCAATCCTCAATTTCTCCTTTCCAATTTACATCGTCTCCAGTTGAATTAAATCCATCCAAGACCTATCTTTTCAGTTGTCCTCCAAACGAGTTCTCCTGCCCATACGTCGCAGTCAGAGACTCTGCTTCGGGGACACTCCTTGATTCGGGCCTAATATCCTGCACCAGGATGTTTAACACAATTTCATCAGTTTCTTGGAGCTCCGACCCAAATGTTTGGACGTTACAATGGCTTAAACCAAATTGTAGAGAGTGCGAAGCTAGGGGCAAATTATGTAAATTGAACAACAACGGTACTGAAGATGCCATCCAATGCTATGAGCCCCCACCCAAACCTGTCAGTAAGATATATTACGCTGCTATAGGTGTGCCTGTTGGTTCAGCTGTTATGGTGCTGGTTTTCTATGCATTCTTCAAAATCTACCACTATTTTAGAATCAAAGGAGAGGATCTAGCCAGAGTGGAGAAGTTTTTACAGGATTATAGGGCATTCAGACCCACTAGATTCTCTTATGCTGATATTTATAGAATCACAAATCATTTGAAGGACAAGTTAGGCGAAGGAACTCATGGAGCGGTGTTCAAGGGTGAAGTCTCTAAGGAAATTTCAGTTGCTGTAAAGATACTCAATAGCATGGAAGGAGATGGAACTGAGTTCATTAACGAGGTAGGAACCATGGCAAAAATTCATCATGTCAATGTGGCTCGCATGCTTGGTTTTTGTGCCGATGGTTTACATCGTGCTCTTGTTTATGATTTCTTCCCCAATGGTTCGTTACGAAACTACATTAATCCACCAGATAACGAGAACTTCCTTGGCTGGGAGAGGCTACATCACATTGCTCTTGGAATAGCTAAAGGGGTTGAGTATCTCCATTATGGCTGCGATGATCGAATTCTACACTTTGACATCAATCCTTCTAATGTGTTACTGGATGACAACTTCGTTCCCAAAATTATTGATTTTGGTTTAGCCAAATTATGTTTGAAAAATCAAAGTACTGTCTCTATTACTGCAGCGAAAGGAACTCTGGGTTATATAGCACCTGAAGTTTTGTCGAGAAATTTTGGAAATGTGAGTTATAAGTCTGACATCTATAGTTTTGGACTGTTGTTGTTGGAAATGATTGGAGGGAGAAAAAATATGGATATATCAGTTGATGGCACTTGCGAAATTCTATATCCAGGATGGGTTTACAACCTGTTTGAAGGGAGAGACGTGCATATTCACTTTGAGGAGGGAGACAATAACATTATTAAAAAGCTTGCAACTATAGGACTTTGGTGCATCCAATGGAATCCAATAAATCGCCCTTCCATGAAGACTGTGCTACAAATGTTAGAAGGAGATGAAGACAATTTAACTATTCCTCCTGATTTATTTGGGTCAACATGTTTTACCAGTTCAAATTCAATTGTTCCAGCAAGATTTAAACATTTAGAGTTAGAAGCGATTCGTGAATGA 1824 0.4145 MAASCISTMRYPKSCWLLLLITVPLELTNMGLCRTEECRESRCGRHGPPIRFPFRRNNIDPDHCGYPGFNLTCHEHHTLLELPAVPLPIQFRVTDIDYNYQSVFISDPENCLPKQLLKLNQSSISPFQFTSSPVELNPSKTYLFSCPPNEFSCPYVAVRDSASGTLLDSGLISCTRMFNTISSVSWSSDPNVWTLQWLKPNCRECEARGKLCKLNNNGTEDAIQCYEPPPKPVSKIYYAAIGVPVGSAVMVLVFYAFFKIYHYFRIKGEDLARVEKFLQDYRAFRPTRFSYADIYRITNHLKDKLGEGTHGAVFKGEVSKEISVAVKILNSMEGDGTEFINEVGTMAKIHHVNVARMLGFCADGLHRALVYDFFPNGSLRNYINPPDNENFLGWERLHHIALGIAKGVEYLHYGCDDRILHFDINPSNVLLDDNFVPKIIDFGLAKLCLKNQSTVSITAAKGTLGYIAPEVLSRNFGNVSYKSDIYSFGLLLLEMIGGRKNMDISVDGTCEILYPGWVYNLFEGRDVHIHFEEGDNNIIKKLATIGLWCIQWNPINRPSMKTVLQMLEGDEDNLTIPPDLFGSTCFTSSNSIVPARFKHLELEAIRE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00258 607 ProSiteProfiles Protein kinase domain profile. 299 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00258 607 Pfam Protein kinase domain 301 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00258 607 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Accr4g00258 607 FunFam PR5-like receptor kinase 374 578 - -
Accr4g00258 607 Gene3D Phosphorylase Kinase; domain 1 274 373 - -
Accr4g00258 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 272 580 IPR045874 GO:0004672
Accr4g00258 607 SUPERFAMILY Protein kinase-like (PK-like) 282 568 IPR011009 -
Accr4g00258 607 Pfam Wall-associated receptor kinase galacturonan-binding 38 107 IPR025287 GO:0030247
Accr4g00258 607 Gene3D Transferase(Phosphotransferase) domain 1 374 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00258 Accr-Chr4 2576631 2578756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00258 63 578 Receptor kinase-like Gene Family AT1G66910 32.014 8.98e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr4g00258 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00258 - - aip:107619931 661.373