Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00247 ATGGAATTTGGCAGAATCGGACCCTCCGACCCGGGTGGTTCCTCCAGGCGTTCCGACGCTCCCATCATTTCTAAGCCCACCTCTTCATTACCCAATTCCTCTCCCCCCAACAAGAGGAAGCTCATCTTCCTCGCAGTTGTCGCCACCGTGCTAATTGTCGGTTCCGCCATCTCTGCCGGCATTGTCATCAGTGGCCGGGCCCGTCGGTCGGACCAAAATGGGGTGGCCATACGGGGAAAGCCCACCGAAGCAATTTCTCGGACCTGTAGCAAAACCCAGTACCCCAACCTTTGTGTGAACTCTTTGCTTGAGTTCCCGGGCTCAACGACGGCGACGGAGCAAGAACTAGTCCACATTTCCTTTAACATGACCCTGCAGCACCTGAGCAAAGCTCTTTACTCATCTAACGGTATCTCCTACGTCCAGATGGATCAACTTGAAAGGTCGGCGTACGAGGACTGCCTGGAGCTCCTGGAGGATTCCGTGGATGCTCTCGCACGATCCCTCACCTCCGTCGCCCCCTCCTCGGAGGACGGCAGCATCAGAGCAGTCGAGTCCCCCGACGATGTGATGACGTGGCTGAGCACCGCTCTCACGAGTCAAGACACGTGTGCGGAGGGGTTGGCGGAGGCGGCGAGGGGGTCCGTGAGGGATCAGATGGCCAATAATTTGAAGGACCTGTCGGAGCTGGTGAGCAATACCCTGGCTATATTCTCGAGCAGCGGGAGTGACGGCGGCGATTTCTCCGGAGTGCCGATTCAGAACAGGAGAAGATTGATGGGAGAGAATAATGCAGATGAGTGGGGCAAGAATAATCCTGGTAATTTGCCGAAATGGTTGAGCAGACGAGACAGGAGGCTGTTGAGCCTCCCGGTGTCGGAGATTCAAGCCGATATAGTCGTGTCGAAGGAGGGAAATGGTACGATGAAGACGATCGCGGAGGCCATCAAGAAGGCGCCGGAGCACAGCAGTCGGCGCTTCATTATTTACTTGAGGGCAGGAAGGTATGAAGAGAAGGATTTGAAGGTGGGAAGGAAGAAGACGAATGTGATGTTGATAGGGGACGGGATGGGCAAGAGCATCATCAGAGGCAAGAAAAATGTTATGGATGGCCTCACCACATTTCACACAGCTTCCTTCGCTGCAAGTGGTGCTGGTTTCATTGCGCGTGACATAACATTCGAGAACTACGCCGGTCCCAACAAGCACCAGGCGGTGGCCCTCCGTGTCGGAGCCGACCACGCCGTGGTTCACCGCTGCGAGATCCTCGGATACCAGGACACGTGTTACGTCCACTCCAACCGTCAATTCTTCCGCGAATGCCGCATTTCTGGAACAGTTGACTTCATTTTTGGAAACGCGGCGGTGGTTTTCCAAAATTGCACCCTCTATGCTCGCAAGCCGATGGACCAGCAAAAGAACACCATTACGGCCCAAAACCGAAAAGACCCGAATCAGAACACGGGTATATCAATCCATAATTGTCAGATCCTTCCTGCCCAGGACCTTGAGCCGGAAAAGGGGAGCATCTCTACCTATCTTGGCCGTCCGTGGAAATTATACTCTCGAACTGTGTATATGCTATCATTCATGGACGATCACATACATCCACGCGGATGGCTGGAGTGGGACGCTTCATTTGCTTTAGACACGTTGTACTATGGTGAGTACATGAATGATGGGCCGGGTGCGGCCGTTGGAGAACGGGTCAGATGGCCTGGTTACCGGGTCATTACATCACAGGTGGAGGCAAGACGGTTCACGGTGGCGGAATTCATATCTGGTTCGTCGTGGCTCCCGTCAACGGGAGTGGCATTTTTGGCCGGCCTATCTACTTAA 1839 0.5438 MEFGRIGPSDPGGSSRRSDAPIISKPTSSLPNSSPPNKRKLIFLAVVATVLIVGSAISAGIVISGRARRSDQNGVAIRGKPTEAISRTCSKTQYPNLCVNSLLEFPGSTTATEQELVHISFNMTLQHLSKALYSSNGISYVQMDQLERSAYEDCLELLEDSVDALARSLTSVAPSSEDGSIRAVESPDDVMTWLSTALTSQDTCAEGLAEAARGSVRDQMANNLKDLSELVSNTLAIFSSSGSDGGDFSGVPIQNRRRLMGENNADEWGKNNPGNLPKWLSRRDRRLLSLPVSEIQADIVVSKEGNGTMKTIAEAIKKAPEHSSRRFIIYLRAGRYEEKDLKVGRKKTNVMLIGDGMGKSIIRGKKNVMDGLTTFHTASFAASGAGFIARDITFENYAGPNKHQAVALRVGADHAVVHRCEILGYQDTCYVHSNRQFFRECRISGTVDFIFGNAAVVFQNCTLYARKPMDQQKNTITAQNRKDPNQNTGISIHNCQILPAQDLEPEKGSISTYLGRPWKLYSRTVYMLSFMDDHIHPRGWLEWDASFALDTLYYGEYMNDGPGAAVGERVRWPGYRVITSQVEARRFTVAEFISGSSWLPSTGVAFLAGLST 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00247 612 ProSitePatterns Pectinesterase signature 2. 443 452 IPR033131 -
Accr4g00247 612 FunFam Pectinesterase 81 241 - -
Accr4g00247 612 Gene3D - 292 610 IPR012334 -
Accr4g00247 612 MobiDBLite consensus disorder prediction 1 34 - -
Accr4g00247 612 Pfam Plant invertase/pectin methylesterase inhibitor 84 237 IPR006501 GO:0004857
Accr4g00247 612 Pfam Pectinesterase 298 595 IPR000070 GO:0030599|GO:0042545
Accr4g00247 612 NCBIfam pectinesterase inhibitor domain 80 238 IPR006501 GO:0004857
Accr4g00247 612 PANTHER PECTINESTERASE 50 600 - -
Accr4g00247 612 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 240 IPR035513 -
Accr4g00247 612 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 239 IPR035513 -
Accr4g00247 612 CDD PMEI-like_3 89 239 - -
Accr4g00247 612 MobiDBLite consensus disorder prediction 20 34 - -
Accr4g00247 612 SUPERFAMILY Pectin lyase-like 295 609 IPR011050 -
Accr4g00247 612 FunFam Pectinesterase 292 610 - -
Accr4g00247 612 SMART PMEI_2 80 237 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00247 Accr-Chr4 2390062 2393023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00247 1 611 Carbohydrate Esterase AT5G53370 62.806 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00247 - - gmx:106796002 850.506