Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00238 ATGGGGAAGAAAGGAGGCGGATGGTTCTCGTCAGTGAAGAAAGTTTTCAGATCGTCATCTAATAAGGACTCGTCGGCGCCAGCCAGGAAGAAGGATAATGAAAGGAGACAGCCTGAAGTGGCAGAGGCTGTGCCTTTTGAGCATTTTCCTCCGGAGAGTTCACATGATGACGTCACCAATGACAACAGCATAGCATCCACGCCGGTGACCGAAGATAGAACTCATGCCATAGCGGTGGCAGCGGCCACAGCTGCCGCTGCAGAAGCTGCAGTTGCGGCGGCACAAGCAGCAGCGAGAGTTGTTCGACTGGCAGGTTATGGACGCCACACTAAGGAAGAAAGAGCAGCAACTCTCATCCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCGTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGGCATAATGTACGGAAGCAGGCACAAATGACAATGCGATGCATGCAAGCATTGGTTCGAGTACAGGCAAGAGTAAGAGCTCGTAGATTCCAGTTGACCCAAGAGCAACTTCACAAGACAGAGGAGGAGTACGAGGACAGAGAATTTGAGGAACAAGTAGTGCCAAAGCCTATGAGCCCTATGAAAAGGACTGATCTGAGCAGGTGGGACAATGGGCGTCACAGCAGCCAGAAAATCCAGGAAAATGATGCCAGAAAACACGAGGCCCTAATGAAGAGGGAGAGAGCTCTTGCTTACGCTCTCAACTGTCAGCAGCAACAGCAGAAGCCGTTTGTGCACTCGGACTCCAATGAAGATGATGTTGGAGCCATCAAGTACCACGACGAGCGAGAAAAGACGCCGTGGGGTTGGAACTGGCTGGACCGTTGGATGTCATCTCAACCTTACAATGTCAGGAGCGTGGGGCCGCGTGAGACCTCTTACATGACCCTTGCCACAACAACCACCACCACCACCACCGACGACATGTCTGAGAAGACGGTGGAGATGGACATGGTGGCACCTCTAGTGTCAAGCAACGTCAGCGCTATGGGGCTAATGAGCCAGGAGTTTCTTGATTCAAGTCCCATGTCCAACAGAAAACACCACCGGCAATTCAGTTTCAATGTGCCCAGCTACATGGCTCCCACTCAATCAGCGAAAGCCAGGGTAAGAGGTCAAATGCAGATAAAGCCACGTGGCTCACCTGGGCCCCAGTGGAACTCGTCCACAAAGAAAGGGCCGGGTATCGGGTCGGTGTGTGATTCTTCAAGCTCCGGAGGAGGAACGTCCAATTACAAGCTTCCGAGGAGCCCGAGCCCAAAAATGAATGGGAGCCGCCCGCAGTCTAGGCGGCACGCAGGTAGCAGCCCAGATTATTCTGGGTTCGAAGATTGGGCACTTCCTCTCGGAGGCCATGGTTGGGCATGA 1407 0.533 MGKKGGGWFSSVKKVFRSSSNKDSSAPARKKDNERRQPEVAEAVPFEHFPPESSHDDVTNDNSIASTPVTEDRTHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHTKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLTQEQLHKTEEEYEDREFEEQVVPKPMSPMKRTDLSRWDNGRHSSQKIQENDARKHEALMKRERALAYALNCQQQQQKPFVHSDSNEDDVGAIKYHDEREKTPWGWNWLDRWMSSQPYNVRSVGPRETSYMTLATTTTTTTTDDMSEKTVEMDMVAPLVSSNVSAMGLMSQEFLDSSPMSNRKHHRQFSFNVPSYMAPTQSAKARVRGQMQIKPRGSPGPQWNSSTKKGPGIGSVCDSSSSGGGTSNYKLPRSPSPKMNGSRPQSRRHAGSSPDYSGFEDWALPLGGHGWA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00238 468 MobiDBLite consensus disorder prediction 24 42 - -
Accr4g00238 468 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Accr4g00238 468 MobiDBLite consensus disorder prediction 212 230 - -
Accr4g00238 468 MobiDBLite consensus disorder prediction 1 66 - -
Accr4g00238 468 Gene3D - 109 163 - -
Accr4g00238 468 MobiDBLite consensus disorder prediction 206 230 - -
Accr4g00238 468 PANTHER IQ-DOMAIN 5-RELATED 1 416 - -
Accr4g00238 468 SMART iq_5 111 133 IPR000048 GO:0005515
Accr4g00238 468 SMART iq_5 134 155 IPR000048 GO:0005515
Accr4g00238 468 MobiDBLite consensus disorder prediction 376 468 - -
Accr4g00238 468 MobiDBLite consensus disorder prediction 393 448 - -
Accr4g00238 468 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Accr4g00238 468 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Accr4g00238 468 Pfam Protein of unknown function (DUF4005) 354 393 IPR025064 -
Accr4g00238 468 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00238 Accr-Chr4 2332326 2334772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00238 1 434 IQD Protein Family AT3G49260 50.108 9.09e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00238 - - aprc:113873497 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00238 4 2332326 2334772 Accr4g00238 4 2332326 2334772 ECH