Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00212 ATGGCGGGTTCGTCCAAGGCGAAGTTCGTCCAAGATTTGTTCCTGTACGCGGCGAGTGCGGCATTCAGTTGCTTGGTTTTGTTCGCTGGGTTTCGACGCCTCGACTCTAATCGTAGGACCTCCAAGAAAGCTCTTCAACACAAAAAAGAGATAGCTAAGCGTCTCGGTCGTCCTGTCATTCAAACAAACGCTTATGAGGATGTCATAGCCTGTGATGTTATTAATCCTAACCTGATTGATGTGGAGTTTGACTCTATTGGGGGACTGCAAAAGATCAAGCAATCTTTGTTTGAGCTTGTTATATTGCCGCTACAACGACCAGAATTATTCTCTTACGGCAAACTTCTTGGCCCACAAAAGGGGGTCCTGTTGTATGGCCCCCCTGGTACTGGGAAAACCATGCTTGCCAAAGCTATTGCAAAGGAATCTGGATCAGCCTTCATTAATGTACGGATGTCAAACCTGATGAGCAAGTGGTTTGGTGATGCCCAGAAACTTGTGGCTGCCATATTTAGCCTGGCTTATAAGCTCCAGCCTGCTATCATATTCGTTGATGAAGTTGACAGCTTTTTGGGTAGGCGTCATAAAACAGATAATGTGGCAATGTTAATCATGAAAACTGAGTTCATGACTTTATGGGATGGATTTACCACCAATAAGAATGCTCGAGTTATGGTCCTTGGAGCAACCAATCGTCCCGCAGAACTTGATGAGGCCATATTACGGCGGTTTTCTCAAGCCTTTGAAATTGGACGTCCAGACCAAAGGGAGAGGGCTGAGATAATGAGAATTATCTTTGCCGGTGAGAGAATTCATGACAACATTGACTTTGATCATATAGCTGCCTTGTGTGAGGGATATACTGGTTCAGATCTGTTTAACCTCTGCAAGAAGGCTGCTTATTTTCCCATTAGGGAACTGCTAGATGAAGAAAAGCGAGGGATAAATGCTCCTGAACCAAGGTATTTGAGACAGTCAGATTTGGAGGAGGCTCTCGCTACTTCACAGAGAACGGAGGTTGCAGCTACTGAATACAAAGGATTAAATGTACAGTCAACAGGGGCAAGAAGGCCAGGACGCAGAGAGGCAGGTGATTATCAGTTTCAAGATGCAATCAATGAACTCTTTAAGATTGTGGTTTCTCAAATTATTAGCCTCCAATCACGTTCCCAGGGTCCGTAA 1182 0.4484 MAGSSKAKFVQDLFLYAASAAFSCLVLFAGFRRLDSNRRTSKKALQHKKEIAKRLGRPVIQTNAYEDVIACDVINPNLIDVEFDSIGGLQKIKQSLFELVILPLQRPELFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSAFINVRMSNLMSKWFGDAQKLVAAIFSLAYKLQPAIIFVDEVDSFLGRRHKTDNVAMLIMKTEFMTLWDGFTTNKNARVMVLGATNRPAELDEAILRRFSQAFEIGRPDQRERAEIMRIIFAGERIHDNIDFDHIAALCEGYTGSDLFNLCKKAAYFPIRELLDEEKRGINAPEPRYLRQSDLEEALATSQRTEVAATEYKGLNVQSTGARRPGRREAGDYQFQDAINELFKIVVSQIISLQSRSQGP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00212 393 SMART AAA_5 118 254 IPR003593 GO:0016887
Accr4g00212 393 Gene3D - 253 335 - -
Accr4g00212 393 Pfam AAA+ lid domain 274 310 IPR041569 -
Accr4g00212 393 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Accr4g00212 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 311 IPR027417 -
Accr4g00212 393 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 30 340 - -
Accr4g00212 393 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Accr4g00212 393 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Accr4g00212 393 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Accr4g00212 393 Gene3D - 80 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00212 Accr-Chr4 2129317 2132112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00212 1 318 Calmodulin-binding Proteins AT3G56690 29.060 2.87e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00212 K22530 - gmx:100796908 590.497