Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00203 ATGATGACGGGTGGTGAGTATATTCAAGCATCAAAAGAACATATTATTGGAAGTTTCACCGGCTCAAAGCCACCTGATAATCCAAAAAAGAAGAAGAACATGGAAAACAAGAGGAGGTTTACTGATGAACAAATTCGATCACTTGAATGCATATTTGAATCAGAGTCAAAGCTTGAGCCAAGAAAGAAGATGCAGTTAGCAAGAGATCTTGGGTTGCAGCCGCGCCAAGTGGCCATATGGTTCCAAAACAGAAGAGCCAGATGGAAATCAAAACATATAGAGCAAGAGTACAGGAAACTCAGAGATGAGTATGACAATTTAGCATCTCTGTTTGAGTCCATAAAGAAAGAGAAGGAATCGTTGCAAGCTGAGGTACAAAAGCTAAGAGATTTAGTGGAGACTTGTGATGATGGCAGTAAAAGGGAAAACAGGGTTGGGATGGAAAATAGCACAGAGGATGGTGCTTCAGGCAGCGTACAAAACAACTATAGCGCTGAAGTAAAGCCAAATTTCTCAAATGAAGGTTTAGAGAATGCCAAGAATGATGATATAAGAGAATTGGGATCAATTGAAAAATGGTATAGTGTTGATCCAAGTGGTCTCTTGGATCAGTCTTGTAGCAGTTCACAGTGGTTAGATTTCTGGAATTGA 651 0.3994 MMTGGEYIQASKEHIIGSFTGSKPPDNPKKKKNMENKRRFTDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKHIEQEYRKLRDEYDNLASLFESIKKEKESLQAEVQKLRDLVETCDDGSKRENRVGMENSTEDGASGSVQNNYSAEVKPNFSNEGLENAKNDDIRELGSIEKWYSVDPSGLLDQSCSSSQWLDFWN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00203 216 ProSiteProfiles 'Homeobox' domain profile. 31 91 IPR001356 GO:0003677
Accr4g00203 216 SMART HOX_1 34 95 IPR001356 GO:0003677
Accr4g00203 216 Coils Coil 83 134 - -
Accr4g00203 216 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 30 162 IPR045224 GO:0003700
Accr4g00203 216 MobiDBLite consensus disorder prediction 25 39 - -
Accr4g00203 216 ProSitePatterns 'Homeobox' domain signature. 66 89 IPR017970 GO:0000981|GO:0006355
Accr4g00203 216 MobiDBLite consensus disorder prediction 1 39 - -
Accr4g00203 216 SUPERFAMILY Homeodomain-like 20 91 IPR009057 -
Accr4g00203 216 FunFam Homeobox-leucine zipper protein ATHB-7 19 91 - -
Accr4g00203 216 Pfam Homeodomain 37 89 IPR001356 GO:0003677
Accr4g00203 216 CDD homeodomain 37 92 IPR001356 GO:0003677
Accr4g00203 216 MobiDBLite consensus disorder prediction 139 162 - -
Accr4g00203 216 Coils Coil 31 51 - -
Accr4g00203 216 PRINTS Lambda-repressor HTH signature 71 87 IPR000047 GO:0003677
Accr4g00203 216 PRINTS Lambda-repressor HTH signature 62 71 IPR000047 GO:0003677
Accr4g00203 216 Gene3D - 19 93 - -
Accr4g00203 216 Pfam Homeobox associated leucine zipper 91 132 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00203 Accr-Chr4 2044003 2044740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00203 1 215 Homeobox Transcription Factor Family AT2G46680 40.909 8.09e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr4g00203 Homeodomain 9.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00203 K09338 - gmx:100499926 277.715