Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00197 ATGGGTGAATTTGGCGTTTGGGACAAGGAAGCCGCAAAAAATAGCAGCAATGCTGCTGTTGGATTGGGTATGAAGGTGCAGAAGCAGAAGCTTGAAGCATTCCCTAGTAAGAACATGATGATGATGGTTCCCCCTCCTCATAATCATCACGATCCTCCACTATATGGTCCCTCCTTTGCTGCTCCTGGTAATGGTGATGTCTTTACAACTTGTAAGTCCCTCACTAATTATACAAACCATTTTGTTCATGCTGCTTCTGCTTCTGGTGCTGCCCATGTTAGACCCTTGCAGTTGCAGCCTCTTCACGTTTCTGCCTCTACCGCCTTCCAATCCTCAGGAGGGTTGATGGCAGCTTCACTGGGATTTCCTTTCACAAAAGCACAGTGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTATTCCTGTTCCTCCTTATCTGCTTATCCCTGTGCCTTCGTCTCGCTCTCCCTCGGATGCCGGTTTGAATCTAATGTTTTCAAGCAGTAGTGACGCAGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGACGTAGCCCCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCACCACCAACAATAATCAGCAAATCAATAGAACTAGCCAAGATTATCCTTCTTTATCTACTCCTACTATGACTATCTCTAACTCCACAATCCGTAAGAACGGATCTTCATCTCCGTTTCTTGCGTCTGCCACCACCTGTCAGCCATACTTTAAATCTTCCCTTTCTATTGATAAGCTCGGCATCAAAGCTGCAAATTTTAATTCCCCTGCTTCCGTTCCCAGCGGCGGGGACTGGCTTCTGAAAGGAGACCCTAATCCCATGGATCCTCAATGGCATCATCTGATACAGAACAAACTCGGATTGAACACGGGAAGTTCGGGTAACAAGGACGCCTCAATTTCAATGACTTATTCGAAAGGCCTTCTTTATACGCATTCGTATGATGTTTTCAGTTCTGAACGAGACCAACACAACAAGCGGTCTCCTTTATACCTCAATTCTCTTGCAGTTCCTATAGAAAATCCTCGGTCTGTAAAACCAAGAGCTTCCATTGATGCTTGGTCGAGTGCAGAAATCAATGCCAACAAATGGAGCTCTGTTGCTGCATCGAATAACGAGTTGTCACTTCCTTCTCTTGATTTGTCAGTGGGTCGTGCTGTGGAGGAAGGCATAGGTTCTTTTCAATTGGGCTTGGGCCAAATGGATCCCCAAGGGAATTGGGCCTCATGTTCAACTCCTGGGGGCCCACTAGCGGAAATGTTGAGGCCCAGCAAGGTGGTGACCAGCACCAGTGAGAGCGCTAGGGCAACAATGGGATCATCTCCATCTGGGGTGCTGCAGAAGACGCTTGCTTCATTTTCTGATGGTAGTTGCAGTAGCAGCCCGAGGCCGAGGGGTGGGACTTCCAGGGTCACTTCTGATATGGCCTTGCTCTGCTTTAATTATAACAAACTACCTTCTTAG 1569 0.471 MGEFGVWDKEAAKNSSNAAVGLGMKVQKQKLEAFPSKNMMMMVPPPHNHHDPPLYGPSFAAPGNGDVFTTCKSLTNYTNHFVHAASASGAAHVRPLQLQPLHVSASTAFQSSGGLMAASLGFPFTKAQWKELERQAMIYKYMMASIPVPPYLLIPVPSSRSPSDAGLNLMFSSSSDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQATTNNNQQINRTSQDYPSLSTPTMTISNSTIRKNGSSSPFLASATTCQPYFKSSLSIDKLGIKAANFNSPASVPSGGDWLLKGDPNPMDPQWHHLIQNKLGLNTGSSGNKDASISMTYSKGLLYTHSYDVFSSERDQHNKRSPLYLNSLAVPIENPRSVKPRASIDAWSSAEINANKWSSVAASNNELSLPSLDLSVGRAVEEGIGSFQLGLGQMDPQGNWASCSTPGGPLAEMLRPSKVVTSTSESARATMGSSPSGVLQKTLASFSDGSCSSSPRPRGGTSRVTSDMALLCFNYNKLPS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00197 522 ProSiteProfiles WRC domain profile. 176 220 IPR014977 -
Accr4g00197 522 Pfam WRC 177 219 IPR014977 -
Accr4g00197 522 SMART QLQ_2 122 158 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr4g00197 522 ProSiteProfiles QLQ domain profile. 123 158 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr4g00197 522 Pfam QLQ 123 156 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr4g00197 522 PANTHER GROWTH-REGULATING FACTOR 5 104 358 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00197 Accr-Chr4 1981863 1984359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00197 386 492 GRF Transcription Factor Family AT5G53660 34.752 3.55e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr4g00197 WRC 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00197 - - pcin:129294126 637.491