Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00186 ATGGGTGATTTGAGAGCAGTGGAAGCGAACGAGAGCGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAACGGGGGAAGAGGACGAAAGTGGAACAGAGAGTAAAGGGGTAGAATTGAATGGTCTGATGAGGTGGGAGAAATTCTTGCCCAAGATGATATTGAGGGTTCTCTTGGTTGAAGCTGATGATTCCACCCGCCAGATTATCGCTGCGCTTCTTAGGAAATGCAGTTACAAAGTGGCTGCTGTTGCTGATGGCCTGAAAGCTTGGGAAATACTGAAGGGAAGATCACACAATATCGATCTAATACTGACAGAAGTAGATTTGCCTTCCATATCTGGCTATGCGCTTCTCACCTTAATCATGGAGCATGAGATTTGCAAAAGCATTCCTGTTATAATGATGTCCTCACAAGATTCAATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGATTATCTTGTTAAGCCCATTAGAAAAAATGAGCTAAGGAATTTGTGGCAGCATGTTTGGCGAAAGCGATCGTCAATAATCGATTCAAATGGTCTTCAAGATGAGAGTGTTGGCCAACAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGTCCTTTAAGTGGGGATGCCGCATGCATTCAAAAAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTACGAAGCCTGATTTGGAAGCTGAAAGTGCCCCTATGGAAAATGTTGAGGAATTTTCTCATCTAAGATGTGGTGACTCGTATCCAAGTGATGAAAAGATTCAGGAGGTTGAAGCTAGTATTCATTTAGGCCACACATCAATTATGCATGATATTCACGCTGGAGGATCAACTCTGGGTTTCTGCGCAAACGGTAAGACAAGCACAATTCATGGCACGGATGGCTGTCCAGAGAATAGGAGTGCTAGTATCAGTGTTGAAGCTCATGATAATCACTATGTTCAAATTAGCTCTTCCAAGGAAGCTATTGACTTGATTGGAGCATTTCATGCAAATTCAAAATGCAGTCCCAAAAGTTCCACTATCAATTGTGTGGGCATGTTTGACTTCTCTCCACTGTTAGATCTTTCCTTAAGAAGAGAACATCCCAGCAGCTTTGAGAATGAAGTCTCCAAAGACAGGCAAACCCTCACGCATTCCAATGCCTCAGCTTTCAAACGGTATACCAGCAGACAATTTCAAGCACCACCAGCAGGTCTCATTAACTTTTGTGATCTAGAAAGAGAACAGAGAACAAATTGTGAGAAAAATAACTCTTATGTTGCTACCGGCTGTAACTCAGATAGTTCAACACCGAGTATGCAAAGAAGTATCGTGTCACCCACAACACCCCAATCTAGAGAATCTGAACTCGCATCTTCATTCTCCCAGCAGCCGCATTCTCTCCCGATTCCAGTAAGAGGAATACGGTTCAATGATCTGTGTAGAACCTATGGTTCTGTCCCTCCCCCAATGTTGGGTGCACAGTCTGATCCCCCATTAATGCCAAGTCCAAGATCTGCTGTGCACCTGGAATCTACTGTTCAAGCGAATGCGTATTCTCTGTCTAATGTCAAAGAGAATGGTTCGGAGCAGCTTTATGAAGATCGAGGTCAAAGTGGAAACAACCTTGGAAGCCACATTGTTTATGTGCAGGATCACAAGCTGGAACATGTGGAAGATCGAGAACATATTTCCCCTGCAACTGATCAGAGTGGAAGCAGTAGTTTCTGCAATGGAAATTTGAGTCGAATGAACAGCATTGGCTACGGAAGCCACTGTGGAAGTAATAGCAATGTTGATCAGGCTGTCATAGTCAGGACTGCTTCAGAGGTGAAGAATTGCGAAGACCACTCGAACATTGCATATTCTCACCGATCCATTCTAAGAGAAGCAGCTCTAAACAAGTTTCGTTTGAAAAGGAAAGAGAGATGTTATGAGAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGTCCTAGGGTGAAAGGACAATTTGTTCGTCAAGTGCACCCTGAACCCCAGGCTGCAGATAAAGACGGCTGA 2061 0.4372 MGDLRAVEANESEKEKEKEKEKTGEEDESGTESKGVELNGLMRWEKFLPKMILRVLLVEADDSTRQIIAALLRKCSYKVAAVADGLKAWEILKGRSHNIDLILTEVDLPSISGYALLTLIMEHEICKSIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRKRSSIIDSNGLQDESVGQQKVEATAENNAASPLSGDAACIQKNKELIEKGSDAQSSCTKPDLEAESAPMENVEEFSHLRCGDSYPSDEKIQEVEASIHLGHTSIMHDIHAGGSTLGFCANGKTSTIHGTDGCPENRSASISVEAHDNHYVQISSSKEAIDLIGAFHANSKCSPKSSTINCVGMFDFSPLLDLSLRREHPSSFENEVSKDRQTLTHSNASAFKRYTSRQFQAPPAGLINFCDLEREQRTNCEKNNSYVATGCNSDSSTPSMQRSIVSPTTPQSRESELASSFSQQPHSLPIPVRGIRFNDLCRTYGSVPPPMLGAQSDPPLMPSPRSAVHLESTVQANAYSLSNVKENGSEQLYEDRGQSGNNLGSHIVYVQDHKLEHVEDREHISPATDQSGSSSFCNGNLSRMNSIGYGSHCGSNSNVDQAVIVRTASEVKNCEDHSNIAYSHRSILREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPEPQAADKDG 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00186 686 MobiDBLite consensus disorder prediction 433 468 - -
Accr4g00186 686 ProSiteProfiles Response regulatory domain profile. 54 172 IPR001789 GO:0000160
Accr4g00186 686 Pfam Response regulator receiver domain 55 166 IPR001789 GO:0000160
Accr4g00186 686 SUPERFAMILY CheY-like 53 181 IPR011006 -
Accr4g00186 686 MobiDBLite consensus disorder prediction 1 34 - -
Accr4g00186 686 MobiDBLite consensus disorder prediction 658 686 - -
Accr4g00186 686 Pfam CCT motif 632 674 IPR010402 GO:0005515
Accr4g00186 686 CDD psREC_PRR 55 158 - -
Accr4g00186 686 PANTHER TWO-COMPONENT RESPONSE REGULATOR 54 237 IPR045279 GO:0009736
Accr4g00186 686 MobiDBLite consensus disorder prediction 1 33 - -
Accr4g00186 686 Gene3D - 51 257 - -
Accr4g00186 686 SMART REC_2 53 168 IPR001789 GO:0000160
Accr4g00186 686 ProSiteProfiles CCT domain profile. 632 674 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00186 Accr-Chr4 1831484 1835660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00186 326 676 Response Regulator Gene Family AT5G24470 32.687 7.35e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr4g00186 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00186 K12130 - gmx:100777119 929.087