Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00170 ATGCCCATTCTAACACTTTGTCATTCTAAGTTGAGTCCTTCGTTAACTCTACAGCTACCTTGTAACTGCATGAGAAGAATGGGTTTGATTACGCAATTTAAGTGTTCTGTAGTTAACAGAACACTGACTTCTAGCTCTGTGGCTCCACCCACATCCAAACCACACTCCCGCCGCTTGAACCGTAAACAAGGGCGTTCATCTTCATTATATAGTCGTCCCAGTTTATCAGAAATGAACAAAGAGAGGATGGCAAACCGTGAGAAAGTTTATGCATTCTTGCGGGGGATTGGTATTGTTCCCGATGAGCTTGATGGCCTGGAACTTCCTGTGACAGTCGAAGTTATGAGGGAACGAGTAGATTTTCTTCACAATTTAGGTCTTACAATTGAAGACATCAACAATTATCCATTAGTTCTTGGCTGCAGCGTCAAAAAGAATATGGTCCCTGTACTTGATTACCTTGGTAAATTGGGAGTCCGGAAATCTACATTCACTCAATTCTTGCAGAGATATCCACAAGTTCTTCATGCTAGTGTTGTCATTGACCTTGAGCCAGTCGTCAAGTATCTTCAAGGGATGGATATCAAGCTCAGTGATATTCCTCGGGTTCTCGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTAGTTGGTATTGGTGTTGGAAGAAGAGAAATTGGAAGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTGGAGTATCTGGAAAGCTTGGGAATTCCAAGATTAGCTGTTGCAAGAATAATAGAGAAACGACCATATATTCTTGGCTTTGGATTGGATGAGAAAGTGAAGCCGAATGTTGAAGCTCTTGAAGAGTTCAATATTAGAAGAGCATGTCTGCCCTCTGTAATTGCGCAGTATCCTGATATCATGGGAATGGACTTGAAGCCTAGGCTTGAGAATCAAAGCAATTTACTTAAATCTTTACTTGATCTGGATTCTGAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAATGCGCCTATGTTAAAGCATGTTAATTTCCTCAAGGATTGTGGGTTTACCTTGCAACAAATGAAGAAGATGATTGTTGGATGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCTTTAGGAGACTTGGTTGCTTTCCCAGCCTTCTTTACATATGGTCTGGAGTCAACTGTAAAACCCAGGCATAAGATGGTTTCCAAGAAGGGAGTGAAGTGTTCCCTTGCATGGATGCTTAATTGCTCAGATGACAAGTTTGAGCAACGAATGGATTATGACACTATTGACATAGAGGAAATGGAAATGGGACCATCATTTGACATGAATTCACTGATGGAACCAAGGAGTGACGAGTCAGCTTCTGATTATGATGACAGTGAGGACGACGAGGATGATGAATAG 1518 0.4144 MPILTLCHSKLSPSLTLQLPCNCMRRMGLITQFKCSVVNRTLTSSSVAPPTSKPHSRRLNRKQGRSSSLYSRPSLSEMNKERMANREKVYAFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTQFLQRYPQVLHASVVIDLEPVVKYLQGMDIKLSDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGRVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARIIEKRPYILGFGLDEKVKPNVEALEEFNIRRACLPSVIAQYPDIMGMDLKPRLENQSNLLKSLLDLDSEDFGRVVEKMPQVISLSNAPMLKHVNFLKDCGFTLQQMKKMIVGCPQLLALNIDIMKLSFDYFQKEMGRPLGDLVAFPAFFTYGLESTVKPRHKMVSKKGVKCSLAWMLNCSDDKFEQRMDYDTIDIEEMEMGPSFDMNSLMEPRSDESASDYDDSEDDEDDE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00170 505 FunFam Transcription termination factor mterf4, chloroplastic 115 252 - -
Accr4g00170 505 PANTHER CGI-12 PROTEIN-RELATED 150 268 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 Pfam mTERF 151 459 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 MobiDBLite consensus disorder prediction 475 505 - -
Accr4g00170 505 Gene3D Transcription termination factor 3, mitochondrial 118 255 IPR038538 -
Accr4g00170 505 Gene3D Transcription termination factor 3, mitochondrial 256 467 IPR038538 -
Accr4g00170 505 FunFam Transcription termination factor MTERF4, chloroplastic 253 467 - -
Accr4g00170 505 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 66 99 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 346 376 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Accr4g00170 505 MobiDBLite consensus disorder prediction 44 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00170 Accr-Chr4 1747040 1748557 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g00170 mTERF 1e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00170 K15031 - qsa:O6P43_020032 763.837