Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00150 ATGGAGACTCTGAAAGCTGCAATCCCGGAGAGCCTGAGGCGAATGATTGGGGAGAGTACTACAGATGATCTTCCGACCACATGTTCTTCTCTTCACCATTTCTTTCTTCATTTTGAGCCTTTTCACCAAATGGTGACTGACTTAGCAGACCCAAAAAATTCTTTATGTGGTAAGAGTGAGGCCGCTGCTTTGGAATCCAAGCAGCTTGGCAACCATTACTTCTTGAGAGAAGATTATATGAAGGCTTTGAATTGCTATACGAAGGCTTTGCGTATGGCACCTTTGGAGGCTTTTGGCCCGGAGAAGAATCTGGTTGCAATATTATACATTAATCGAGCTACTGTATTGCATAAATTGAATCTTTTAATTGAGTGTTTGCGAGACTGCACTCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGTTTCATTGGGAAATCATAAAGATGCAATCTGTGATCTCAATGTGGCAAAGAGCATGGAATCATCATTGAGTGGGAAGAAACAAATAGAAAGTGAACTTAAAAATATATCACACCAATGCGAGGGAGCAACTTCAGGTGTTCAGAATGAGAAGAATGGCTTGGATACAGTAGATGGGATGCCCCAAATAAAGCTACAGTTGGTCACCACGCCTGATAAAGGACGGGGTATGACATCATCATGTGACATATCTCCAGCTTCTTTAGTTCATTGTGAAGAACCTTATGCCATGATAATATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTACTGATGCAGTTCCTTGTAGATCTTGTTCAATACCACTATATTGCTCCCAGCAATGCCAGATACAGGCTGGTGGACAAATGTTCAAGATTAAGCCTGAAGACCATGGCATTTTTAACAGTCTGCCCAGTGATCTTGGGGCATATGCTACAGGAATTATATTAGGCAATGGTTCTAAACATGAGATTGAGGATATTCCTGAACATAAGCATGAGTGCCAAGGTGTACATTGGTCTATAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCACAAAAGTGCATATGAAGATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACAACTGCCATCTGATTGCAAATTGGATTTACATATATATGCCATTATGTTGCTATACTGTCTGCTACACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTTATAATTTTTTCTCAAATCAAAGTGAATTGCATGACTGTTGTTCGTATAAGATCTATAGATGCTCATGGACTACAGGATCAGTTTGGAAAATCTCTAGCCAGTGGATACTTGACGAGTAGTGTGGAACAGGTCAGAGTGGGTAAAGCTATTTACAAAGATGGCAGCTTGTTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGTACCTTGTGTATACGGACAACAGAAGTTGTAGCAGCTGGGTCTCAGCTGGAATTATCGTATGGTCCACAGGTTGGGTTATGGAATAGTAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCGTTTCAATGTCACTGTGGTGCTTGTTCAGAATTCAATCTATCTGATATTGTCCTCAATGCTTTTCGCTGTGTCAGTCTAGATTGTCCTGGTGCAGTCTTGGACATCAGAGTAATTGACTGGGAAAGGTGGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTCAATATGAATGATGAAATTTATAAAATCTGTCCTCGTTTATTCAACCAAAATGATGGCTATGCTCATAATCAGCCAGGGTACTGTTTGAGATGTGGTTCTTACCGTGATTTAGAGTCTTCATGCACTGCAGTTGATAACGCTTGGATATGCATCAAAAGATTGCAGGATGCAGTAACATCAAAAGAAATTTCGAATACTACTATTTCAGATGCATTAAAGTCTCTTCGTATGCTGAGGTCATATTTGCATTCCTACAACAAGCATATTGCAGAGGGAGAGGACAGCCTTGCTCAGGCCTTTTGTACGGTGGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATAATCCGGATGATATTGTCATTGGTTTTGAGCTAGTGAAGCTTTGTTCCATTCAAATTTCCATGGGTGACAAAATTGCGCTGGAAAGCATAAATCGAATATGTGATATCTTCTCACGTTATTATGGACTTCATGCACACTCGGTATTCCCATATCTTCAGTACCTTAGAAAGGAAACTGAGAATTGA 2331 0.405 METLKAAIPESLRRMIGESTTDDLPTTCSSLHHFFLHFEPFHQMVTDLADPKNSLCGKSEAAALESKQLGNHYFLREDYMKALNCYTKALRMAPLEAFGPEKNLVAILYINRATVLHKLNLLIECLRDCTRALQICPSYAKAWYRRGKANVSLGNHKDAICDLNVAKSMESSLSGKKQIESELKNISHQCEGATSGVQNEKNGLDTVDGMPQIKLQLVTTPDKGRGMTSSCDISPASLVHCEEPYAMIILKQCRETHCHYCLNDLPTDAVPCRSCSIPLYCSQQCQIQAGGQMFKIKPEDHGIFNSLPSDLGAYATGIILGNGSKHEIEDIPEHKHECQGVHWSIVLPSEIVLAGRVLAKFFHKSAYEDITYFVKSLELFHCYAQLPSDCKLDLHIYAIMLLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTVVRIRSIDAHGLQDQFGKSLASGYLTSSVEQVRVGKAIYKDGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGSQLELSYGPQVGLWNSKDRQAFLKDEYSFQCHCGACSEFNLSDIVLNAFRCVSLDCPGAVLDIRVIDWERWKIKHFPGADKVNMNDEIYKICPRLFNQNDGYAHNQPGYCLRCGSYRDLESSCTAVDNAWICIKRLQDAVTSKEISNTTISDALKSLRMLRSYLHSYNKHIAEGEDSLAQAFCTVGELQLAMDHCKASLLILEKLYNPDDIVIGFELVKLCSIQISMGDKIALESINRICDIFSRYYGLHAHSVFPYLQYLRKETEN 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00150 776 Gene3D Tetratricopeptide repeat domain 38 200 IPR011990 GO:0005515
Accr4g00150 776 Gene3D Tetratricopeptide repeat domain 522 774 IPR011990 GO:0005515
Accr4g00150 776 ProSiteProfiles SET domain profile. 213 517 IPR001214 GO:0005515
Accr4g00150 776 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 775 - -
Accr4g00150 776 Gene3D SET domain 433 516 IPR046341 -
Accr4g00150 776 SUPERFAMILY TPR-like 63 171 IPR011990 GO:0005515
Accr4g00150 776 SUPERFAMILY SET domain 211 546 IPR046341 -
Accr4g00150 776 Pfam Tetratricopeptide repeat 62 122 - -
Accr4g00150 776 SMART tpr_5 140 173 IPR019734 GO:0005515
Accr4g00150 776 SMART tpr_5 681 714 IPR019734 GO:0005515
Accr4g00150 776 SMART tpr_5 106 139 IPR019734 GO:0005515
Accr4g00150 776 SMART tpr_5 63 96 IPR019734 GO:0005515
Accr4g00150 776 Gene3D - 257 289 - -
Accr4g00150 776 Gene3D SET domain 226 256 IPR046341 -
Accr4g00150 776 Pfam SET domain 224 517 IPR001214 GO:0005515
Accr4g00150 776 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr4g00150 SET 2.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00150 K24634 - pcin:129294093 1390.94