Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00142 ATGAGTGCTCTGTGCCCCGAACATGTCCTTGCAAACAGGGAAAGTATCATCAAAGAGCTGGTCGAGGGCAAGGAGTGTGCTTCCCAGCTCAAGCTTTTGTTTCAAAACCCTTCTGGGCCTAACGCCACTACTCCCTCTGCACAACAACTTGTCGCCAAAATTTTGAGATCCTTCACCCAAAGTATTTCTGTTCTCACTTCCTCCGAAGCCGGCGGCGAGATTTTGGCGATTTCCTGCAATGACGGGAGGCCGGACGAATCCGGCGAGAGCAGGAAGAGATCACCGCCGCCCGCAAAGGATCGGCGAGGCTGCTACAAAAGAAGGAAGGCAGCAGATACACGGACCAAAATCTCTCAAACTATGGAAGATGAATACGAATGGAGAAAGTACGGACAAAAAAAGATCCTTAATTCTAAATTCCCCAGGAGTTACTTTAGGTGCACTCGGAAGCACGACCAAGGGTGTAAGGCAGTCAAACAGGTTCAGCGCAGAGAGGAGAATCCGGAAATGTTCCTGACAATCTACATTGGAGTTCACACGTGCAAGGACAACCTCAAGACTCCCGAAATGGTCGTCACAGATTCTGGTAATTGGGAATCATATCTGGCGCCGACTGATTCTAACAAGGCACCACACGATGATCAAAAGGCCTCATCATCACCAACCCCAACCATAAAGCAGGAATATCCCAAGGTGGACACACCAGTGAGTGAAATAACAGATAACTCGGATCCTAATCTGTGGCCAGATTGGAAGGACTTTGAGCTTTCGGAGCCCTTGAAGATGTCAGATGACTTGGATTTTGGAGTGGATCAATCTGTCGGGTTTGGCGCTGATCATCATTTCCACTTTGAGTATTGA 861 0.4855 MSALCPEHVLANRESIIKELVEGKECASQLKLLFQNPSGPNATTPSAQQLVAKILRSFTQSISVLTSSEAGGEILAISCNDGRPDESGESRKRSPPPAKDRRGCYKRRKAADTRTKISQTMEDEYEWRKYGQKKILNSKFPRSYFRCTRKHDQGCKAVKQVQRREENPEMFLTIYIGVHTCKDNLKTPEMVVTDSGNWESYLAPTDSNKAPHDDQKASSSPTPTIKQEYPKVDTPVSEITDNSDPNLWPDWKDFELSEPLKMSDDLDFGVDQSVGFGADHHFHFEY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00142 286 MobiDBLite consensus disorder prediction 79 116 - -
Accr4g00142 286 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00142 286 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00142 286 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 218 IPR044810 GO:0003700
Accr4g00142 286 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00142 286 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00142 286 MobiDBLite consensus disorder prediction 202 228 - -
Accr4g00142 286 MobiDBLite consensus disorder prediction 84 116 - -
Accr4g00142 286 Gene3D WRKY domain 106 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00142 Accr-Chr4 1512795 1514413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00142 11 194 WRKY Transcription Factor Family AT3G56400 46.907 5.57e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g00142 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00142 - - qsu:112006667 258.07