Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00141 ATGAGTGCTCTGTGCCCCGAACATGTCCTTGCAAACAGGGAAAGTATCATCAAAGAGCTGGTCGAGGGCAAGGAGTGTGCTTCCCAGCTCAAGCTTTTGTTTCAAAACCCTTCTGGGCCTAACGCCACTACTCCCTCTGCACAACAACTTGTCGCCAAAATTTTGAGATCCTTCACCCAAAGTATTTCTGTTCTCACTTCCTCCGAAGCCGGCGGCGAGATTTTGGCGATTTCCTGCAATGACGGGAGGCCGGACGAATCCGGCGAGAGCAGGAAGAGATCACCGCCGCCCGCAAAGGATCGGCGAGGCTGCTACAAAAGAAGGAAGGCAGCAGATACACGGACCAAAATCTCTCAAACTATGGAAGATGAATACGAATGGAGAAAGAGTTACTTTAGGTGCACTCGGAAGCACGACCAAGGGTGTAAGGCAGTCAAACAGGTTCAGCGCAGAGAGGAGAATCCGGAAATGTTCCTGACAATCTACATTGGAGTTCACACGTGCAAGGACAACCTCAAGACTCCCGAAATGGTCGTCACAGATTCTGGTAATTGGGAATCATATCTGGCGCCGACTGATTCTAACAAGGCACCACACGATGATCAAAAGGCCTCATCATCACCAACCCCAACCATAAAGCAGGAATATCCCAAGGTGGACACACCAGTGAGTGAAATAACAGATAACTCGGATCCTAATCTGTGGCCAGATTGGAAGGACTTTGAGCTTTCGGAGCCCTTGAAGATGTCAGATGACTTGGATTTTGGAGTGGATCAATCTGTCGGGTTTGGCGCTGATCATCATTTCCACTTTGAGTATTGA 822 0.4915 MSALCPEHVLANRESIIKELVEGKECASQLKLLFQNPSGPNATTPSAQQLVAKILRSFTQSISVLTSSEAGGEILAISCNDGRPDESGESRKRSPPPAKDRRGCYKRRKAADTRTKISQTMEDEYEWRKSYFRCTRKHDQGCKAVKQVQRREENPEMFLTIYIGVHTCKDNLKTPEMVVTDSGNWESYLAPTDSNKAPHDDQKASSSPTPTIKQEYPKVDTPVSEITDNSDPNLWPDWKDFELSEPLKMSDDLDFGVDQSVGFGADHHFHFEY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00141 273 MobiDBLite consensus disorder prediction 79 116 - -
Accr4g00141 273 ProSiteProfiles WRKY domain profile. 129 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00141 273 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 204 IPR044810 GO:0003700
Accr4g00141 273 Gene3D WRKY domain 106 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00141 273 SUPERFAMILY WRKY DNA-binding domain 119 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00141 273 MobiDBLite consensus disorder prediction 84 116 - -
Accr4g00141 273 SMART WRKY_cls 121 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00141 273 MobiDBLite consensus disorder prediction 189 215 - -
Accr4g00141 273 Pfam WRKY DNA -binding domain 125 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00141 Accr-Chr4 1512795 1514413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00141 11 181 WRKY Transcription Factor Family AT3G56400 41.237 5.30e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g00141 WRKY 1.6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00141 - - qsu:112006667 227.639