Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00140 ATGAGAGCTCTGTGCCCGGAACATGTCTCTGCAAACAAGGAAAGTATCATCGGAGAGCTGGTTGAGGGCAAGGAGTGTGCTTCCCAGCTCAAGCTTTTGTTTCAAAACCCTTCTGGGCCTCACGACACTACTCCCTCTGCACAACAACTTGTCGCCAAAATTTTGACATCCTTCACCCAAAGTATTTCCGTCCTCACTTCCTCCGAAGCCGGCGGCGAGATTTTGGAGATTTCCTGCAATGACCGGAGGCCCGACGAATCCGGCCAGAGCAGGAAGAGATCACCGCCGCCCGCAAAGGATCGGCGAGGCTGCTACAAAAGAAGGAAGGCAGCAGATACACGGACCAAAATCTCCCAAACTATGGAAGATGAATACGAATGGAGAAAGTATGGACAGAAGAAGATCCTTAATTCTAAATTCCCCAGGAGTTACTTTAGGTGCACTCGGAAGCACGACCAAGGGTGTAAGGCAGTCAAACAGGTTCAGCGCAGAGAGGAGAATCCGGAAATGTTTCTGACAATGTACATTGGAGTTCACACGTGCAAGGACAACCTCAAGGCTCCCGAAATGGTCACAGATTCTGGTATTTGGGAATCATATCTGGCGCCGACTGAATCTAACAAGGCATCAAACGATGATCAAAAGGCATCATCATCATCAACCCCAAACATGAAGCAGGAATATCCCAAGGTGGACACACCACTGAGTGAAATAACAGATAACTCGGATCCTAATCTGTGGCCAAATTTGAAGGACTTTGAGCTTTTGGAGCCCTTGAAGATGTCGGATAACTTGGATTTTGGAGTGGATCAATCTGTTGGGTTTGGCACCGATCATCATCTCGACTTTGAGTATTGA 858 0.4802 MRALCPEHVSANKESIIGELVEGKECASQLKLLFQNPSGPHDTTPSAQQLVAKILTSFTQSISVLTSSEAGGEILEISCNDRRPDESGQSRKRSPPPAKDRRGCYKRRKAADTRTKISQTMEDEYEWRKYGQKKILNSKFPRSYFRCTRKHDQGCKAVKQVQRREENPEMFLTMYIGVHTCKDNLKAPEMVTDSGIWESYLAPTESNKASNDDQKASSSSTPNMKQEYPKVDTPLSEITDNSDPNLWPNLKDFELLEPLKMSDNLDFGVDQSVGFGTDHHLDFEY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00140 285 Gene3D WRKY domain 106 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00140 285 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00140 285 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00140 285 MobiDBLite consensus disorder prediction 203 227 - -
Accr4g00140 285 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00140 285 MobiDBLite consensus disorder prediction 79 115 - -
Accr4g00140 285 MobiDBLite consensus disorder prediction 203 228 - -
Accr4g00140 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 228 IPR044810 GO:0003700
Accr4g00140 285 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00140 Accr-Chr4 1501196 1502845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00140 11 250 WRKY Transcription Factor Family AT3G56400 42.629 2.25e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g00140 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00140 - - qsu:112006667 257.299