Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00139 ATGAGTGCTCTGTGCCCGGAACATGTCTCTGCAAACAAGGAAAGTATCATCAGAGAGCTGGTTGAGGGCAAGGAGTGTGCTTCCCAGCTCAAGCTTTTGTTTCAAAACCCTTCTGGGCCTCACGACACTACTACTCCCTCTGCACAACAACTTGTCGCCAAAATTTTGAGATCCTTCGCCCAAAGTATTTCCGTCCTCACTTCCTCTGAAGCCGACGGCGAGATTTTGGCCATTTCCTGCAATGACCGGAGTCCGGAAGAATCCGGCGAGAGCAGCAAGAGATCACCGCCGTCCGCAAAGGATCGGCGAGGCTGCTACAACAGAAGGAAGGCAGCGGACACACGGACCAAAATCTCTCAAACTATGGAAGATGAATACGAATGGAGAAAGTATGGACAGAAGGAGATCCTTAATTCTAAATTCCCCAGGAGTTACTTTAGGTGCACTCGGAAGCACGACCAAGGGTGTAAGGCAGTAAAACAGGTTCAGCGCATAGAGGAGAATCCGGAAATGTTCCTGACAATCTACATTGGAGTTCACACATGCAAGGACAACCTCAAGGCTCCCGAAATGGTCACTGATTCTGGTCATTGGGAATCATATCTGGCGCCGACTGAATCTAACAAGCCACCAGACGATGATCAAAAGGCCTCATCATCAACCCCAACCGTAAAGCAGGAATATCCCAAGGAGGACACACCACTGAGTGAAATAACAGATAACTCGGATCCTAATTTGTGGCCAGATTTGAAGGACTTTGAGCTTTCGGAGCCCTTGAAGATGTTGGATAAATTGGATTTTGGAGTGGATCAATCTGTTGGGTTTGGCACGGATCATTATCTTCACCTTGAGTATTGA 858 0.4802 MSALCPEHVSANKESIIRELVEGKECASQLKLLFQNPSGPHDTTTPSAQQLVAKILRSFAQSISVLTSSEADGEILAISCNDRSPEESGESSKRSPPSAKDRRGCYNRRKAADTRTKISQTMEDEYEWRKYGQKEILNSKFPRSYFRCTRKHDQGCKAVKQVQRIEENPEMFLTIYIGVHTCKDNLKAPEMVTDSGHWESYLAPTESNKPPDDDQKASSSTPTVKQEYPKEDTPLSEITDNSDPNLWPDLKDFELSEPLKMLDKLDFGVDQSVGFGTDHYLHLEY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00139 285 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00139 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 215 IPR044810 GO:0003700
Accr4g00139 285 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00139 285 Gene3D WRKY domain 107 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g00139 285 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00139 285 MobiDBLite consensus disorder prediction 201 249 - -
Accr4g00139 285 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g00139 285 MobiDBLite consensus disorder prediction 80 116 - -
Accr4g00139 285 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00139 Accr-Chr4 1487310 1488941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00139 11 250 WRKY Transcription Factor Family AT3G56400 42.629 6.08e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g00139 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00139 - - gmx:100170683 259.996