Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00127 ATGAGCACTGTTAATAACATTGGTTTTCCTTCACAATTCAGAGCATCTCTCGACATTGGTGGGGTTTCAAAGCAGCGGAAGAAGAAATGCTCATGGAGTTTTATTGCCCGGAATACCCCAATCAGTTCGAATCATCAAATCTTTTGCAAACTATCAGACAGTGGGATCGAGGAGAACTCCGCAAGCACGAGGGCCTCTAATTCCAAGAACAGGATGGAGGAGTACAATACAGCTATGAAGAAAATGATGAGGAACCCTTATGAGTATCACCACGACCTGGGTATGAATTACACACATATAATTGATAGCTTGATTGTGGGCTCTCAGCCACAAAAACCTGAAGATATAGATCACCTCAGAAAGGAAGAAGACGTTGCCTACATTCTAAACTTGCAGCAGGACACGGATGTGGAGTACTGGGGAGTAGACTTAAAATCTATAATAAGAAGATGCCATGAACTCGGTATTCGTCACATGAGGAGGCCTGCAAAGGACTTCGATCCAAACTCCCTGAGAAATGAGCTGCCAAAAGCAGTTTCATCACTGGAATGGGCTTTTTCTGAGGGTAAAGGAAGAGTGTATGTGCACTGCACAGCTGGACTTGGAAGAGCTCCGGCAGTGGCAATTGCTTACCTGTTCTGGTTCTGTGACATGAATCTAAATGCAGCATACGATATGTTGACAGCTAAGAGACCTTGCGGACCCAATAAAAGAGCAATACGCGGGGCTACCTATGATTTGGCGAAGAATGATCCGTGGAAAGAGCCATTTGAGAGTCTTCCAGAATATGCATTTGAGGATGTAGCTGACTGGGAGAGGGACCTGATTCAAAATCGAGTACGTTCTCATCGTGGAACTTTATCCTTCCTCAAGTATTCCTGTTTACTAAACAGAACAGCCATGCTGTACTGTGGGGAATAG 921 0.4452 MSTVNNIGFPSQFRASLDIGGVSKQRKKKCSWSFIARNTPISSNHQIFCKLSDSGIEENSASTRASNSKNRMEEYNTAMKKMMRNPYEYHHDLGMNYTHIIDSLIVGSQPQKPEDIDHLRKEEDVAYILNLQQDTDVEYWGVDLKSIIRRCHELGIRHMRRPAKDFDPNSLRNELPKAVSSLEWAFSEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNAAYDMLTAKRPCGPNKRAIRGATYDLAKNDPWKEPFESLPEYAFEDVADWERDLIQNRVRSHRGTLSFLKYSCLLNRTAMLYCGE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00127 306 Coils Coil 65 85 - -
Accr4g00127 306 ProSiteProfiles Dual specificity protein phosphatase domain profile. 96 253 IPR020422 GO:0006470|GO:0008138
Accr4g00127 306 Pfam Dual specificity phosphatase, catalytic domain 118 236 IPR000340 GO:0008138|GO:0016311
Accr4g00127 306 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 31 255 - -
Accr4g00127 306 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 79 286 - -
Accr4g00127 306 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 238 IPR029021 -
Accr4g00127 306 CDD DSP_laforin-like 95 242 IPR045204 GO:0019203
Accr4g00127 306 SMART dsp_5 96 246 IPR020422 GO:0006470|GO:0008138
Accr4g00127 306 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 232 IPR000387 GO:0016311|GO:0016791
Accr4g00127 306 Gene3D Protein tyrosine phosphatase superfamily 79 286 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00127 Accr-Chr4 1388391 1390312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00127 47 286 Protein tyrosine phosphatase (PTP) family AT3G10940 77.500 6.39e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00127 - - gmx:100805592 455.292