Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00119 ATGGTTTCTAAAGAACAAAGCCACAAGAGAGCAGTGTTGCATGAGAAGCTTCAACTCCTTCGTTCTACCACTAACTCTCATGCTCTGAACCGAACCGCGATCCTAATGGATGCCTCGAAGTACCTCGCAGAGCTAAAACAAAAGGTAGAGAGACTAAATCAAGACATAGCCACTGCACAGACTTCTAGTGACCAGAATCCCTTGCCAACGGTGACAGTAGAAACCTTAGAAAAGGGATTTCTTGTGGACGTGTTTGCAGCGAAGACTTGCCCGGGTCTGCTGGTATCCATACTGGAAGCCTTTGAAGGGATGGGTCTGAGTGTGCTGGAAGCTAGGGTTTCTTGTGCTGACACTTTTCGATTTCAAGCAGTCGGAGGAGAAGAGGAAGAAGGCGTGAATATGGATGCAGGAGCAGTGAAAGAGGTAGTGGGACAGGCGATAAAGAAATGGAGAGAGACTAGTAGAGACGAACAGTAA 477 0.4738 MVSKEQSHKRAVLHEKLQLLRSTTNSHALNRTAILMDASKYLAELKQKVERLNQDIATAQTSSDQNPLPTVTVETLEKGFLVDVFAAKTCPGLLVSILEAFEGMGLSVLEARVSCADTFRFQAVGGEEEEGVNMDAGAVKEVVGQAIKKWRETSRDEQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00119 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 152 - -
Accr4g00119 158 Coils Coil 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00119 Accr-Chr4 1327463 1328766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00119 13 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.645 9.76e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00119 - - tcc:18600910 218.394