Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00117 ATGTCGCCGGCGGCGGGAGTAAACATCCCCCTACTACCGAAAGGGGAGGGAGCTGCCAAACCAGCATCGGTCGCCGGTGCTGTGTTCAACGTCGCTACCACCATAGTGGGCGCTGGAATCATGTCTATTCCGGCGACTGTAAAGGTTGTGGGGGTGATTCCGGCTTTTTTTATGATTTTGATCATCGCTATGCTGGCCGAAGTGTCTGTGGATTTTCTATTAAGGTTTACGCATTCCGGCGAGACGTCAACATACTCCGGCGTGATGAGGGAGGCATTCGGGCCGGCGGGCGCAATAGCCACGCAAATTTTTGTCATAATTACCAACTATGGAGCATTAATTATGTACTTGATTATTATTGTTTCAGGGAGGCATTTCGGACTGGCGTTTGTTGCTAAACCGAAAGGGGATGTGCTCTCTGGAAAAGGTGAGCATTTGGGCATTTTGCAACAGTTGTTTGGAGTTCACTGGTGGAACTGTCGGGAATTTGCTCTACTTGTCACCCTAGTCTGTGTTATGCTTCCATTAGTCTTCTACAGACGAGTAGAGTCTTTAAAGTTCAGTTCTGCAATATCCACTCTTCTAGCGGTGGCATTCGTTGGCATATGTTCAGGGATGGCAATAGCTGCTCTGTTCGCAGGCAAAACACATTTTCCAAGACTGATTCCACACTTGGACGAGCAGACCTCTTTCTTTGATCTGTTTACAGTTGTTCCAGTCATAGTCACAGCTTTTACATTTCATTTTAATGTACATCCGATTGCTTTTGAGCTTGCAAAGCCATCGGACATGGGGACAGCAGTTCGAATAGCAATAGTGCTTTGCGCAGTCATCTACTTCTCCATAGGCCTGTTTGGGTACCTCTTATTTGGGGATTCAATCAAGTCAGACATTCTTATCAATTTTGATCAGAATGCCAAGTCTGCAGTTGGTTCGTTGCTCAATAGTGTAGTCCGGATAAGCTATGCGGTTCACATTATGCTAGTGTTCCCTCTCCTGAACTTTGCTTTGAGAACCAACATAGATGAACTCCTCTTCCCCAAGATGTCTCAGCTGGCCACTGACAAGAAGAGATTTGCGGCCATCACTCTGGTGCTGCTTGTCTCCATCTATCTTGCTGCCATAGCCGTCCCAGATATTTGGTTCTTCTTTCAGTTCATGGGATCAACATCTGCCTTGTGCCTTGCCTTTGTTTTCCCCGGCGCTATTGCCCTGAGGGATGTTCAGGGTATATCGACAAGAGGGGACAAAATCATCGCACTGGTAATGATTATCCTGGCTGTAGGGACTAGTGCGGTTGCCATTTCCACCAACATATATAATCTCCTTCACTAG 1335 0.4689 MSPAAGVNIPLLPKGEGAAKPASVAGAVFNVATTIVGAGIMSIPATVKVVGVIPAFFMILIIAMLAEVSVDFLLRFTHSGETSTYSGVMREAFGPAGAIATQIFVIITNYGALIMYLIIIVSGRHFGLAFVAKPKGDVLSGKGEHLGILQQLFGVHWWNCREFALLVTLVCVMLPLVFYRRVESLKFSSAISTLLAVAFVGICSGMAIAALFAGKTHFPRLIPHLDEQTSFFDLFTVVPVIVTAFTFHFNVHPIAFELAKPSDMGTAVRIAIVLCAVIYFSIGLFGYLLFGDSIKSDILINFDQNAKSAVGSLLNSVVRISYAVHIMLVFPLLNFALRTNIDELLFPKMSQLATDKKRFAAITLVLLVSIYLAAIAVPDIWFFFQFMGSTSALCLAFVFPGAIALRDVQGISTRGDKIIALVMIILAVGTSAVAISTNIYNLLH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00117 444 PANTHER AMINO ACID TRANSPORTER 18 428 - -
Accr4g00117 444 Pfam Transmembrane amino acid transporter protein 21 437 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00117 Accr-Chr4 1315682 1318310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00117 1 442 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.788 2.97e-165 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00117 - - gmx:100815694 640.958