Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00067 ATGGCTGTCTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAACGGCTTCACGGAGGCAGAGTTCGCCCTCAAAGAGGACTTCATCGAAAAGGGTGATACGGCGTCATCCGACTACGAGAAATTCTTCTTCCCGATGGTGCCACCGCCACCGCCGGTCAGAGTCCGATCTTTTTCCCAATTTTTGGAAAGGCAGTATGGCAGAGACTGCTCGAAATCAAGCTCTAAGTCGTCGGACGACGAGTTTGTGAGCTTGGGCTCATCTACTTCGGGCGTTTCTTCTTCGGAATTCATCAATCCATATGGAATTCGCTCCTCATCCCAAACTCACAAAGATTCTGAATCTTCGTCAGATAGGTTATCTCAATTTGGCACAGCACGTGACTACCATGAATTTGACATGCAAAATGAACCATATTGGTATAATGAGAAAGATGATGACGATTTCATGACCCCCAGTTTTGAGGGGCCAGAGTTCCTTGGCTGTCAAAGTGAGGATAAGTTCATCATGACATCAGAAGTGGAGAATCAACATGAAAATCTTGTGGAAAATAATTACAAAAGTGAAGTATTGCAAGCGGAGGGAATTGATGGTGATTGCATGGACAAACTATGCCTTTATAATCATTCTGATGTAGGAAATGAAAATGTGACTTGTTTAGAAGACTTTTGCCATATTGATAAGAAAGAGCAGCTTGAAGGAGGATTACTTGGAGATGTTGACAATCCTACTTTTGTCCATAATTGTGAAGTTCCCTTTAGCAAACCCTCAGCTGGTTCAAGAGAGTCTTGTGGTGGAGATCCTTGTGATGACCGCTGCCCAAGTTTAAAGGAAATTCATCTGAATGATTTGCATTTAAAGGTTGTTGGGGATAGTTCCTCTACTGATTCTGCTCCAGAGAATTCTATGAACCAAACTTTTGACCTCTATCCTCACAGTAACAGCAATAAGGAGCAGAAAGCTCCCTATGACTTAACTATTGAAGTTGCTGAAACAGACCTGCCGAATGGACTGACCAACTATAAAGCTCAAAATTGTGGAGAATTCACTGAAGAATGCCAAGATCCAGAAAATGCAGCAGATGGAGAAGATGTTACTGATGATGAGCTTTTAAAGTACAGTCACGAGGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAAGATCTGCCCATTGTGCTGAATAAAGTCATAGGCGGCAGGTACTATGTAACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCACACAGGAATAGATGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTAGATGAAATTAAACTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATAAACACCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACCGAGCTTCTGCGAGCAAACCTATATGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAGGCATATTTCACATTGAACAGATTGCAGCTCATTACTCGACAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACTGTGATCTGAAGCCAGAAAATATTCTTATTAAAAGTTATAAAAGATGTGAAATTAAAGTTATTGATCTTGGAAGCAGTTGCTTTCAATCAGACAATTTATGCCTATATGTACAGTCGCGATCCTATAGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGTTGTATCTTGGCTGAGCTATGTTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTGCAATTATTCTCGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTTAGGGGCCAGGAAACGCACAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGGAGACAAACCAATTGGAGTACATTATTCCAGAGGAGTGGTCGTTGGAGCAGTACCTGCAGGTTTCTGATACCATGTTTATTGACTTCGTCAGATTCTTGCTCAACACCAACCCAAGAAGGCGACCAACTGCAAGACAGGCACTAAAGCATCCATGGCTTTCCCATGTTTATGACTCCCAGTAG 2172 0.4121 MAVSDVGAVLEFLRNNGFTEAEFALKEDFIEKGDTASSDYEKFFFPMVPPPPPVRVRSFSQFLERQYGRDCSKSSSKSSDDEFVSLGSSTSGVSSSEFINPYGIRSSSQTHKDSESSSDRLSQFGTARDYHEFDMQNEPYWYNEKDDDDFMTPSFEGPEFLGCQSEDKFIMTSEVENQHENLVENNYKSEVLQAEGIDGDCMDKLCLYNHSDVGNENVTCLEDFCHIDKKEQLEGGLLGDVDNPTFVHNCEVPFSKPSAGSRESCGGDPCDDRCPSLKEIHLNDLHLKVVGDSSSTDSAPENSMNQTFDLYPHSNSNKEQKAPYDLTIEVAETDLPNGLTNYKAQNCGEFTEECQDPENAADGEDVTDDELLKYSHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNKVIGGRYYVTEYLGSAAFSKVVQAHDLHTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLITRQCLEALQYLHSLGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVAIILARMIGMLGPIDLEMLVRGQETHKYFTKEYDIYHVNEETNQLEYIIPEEWSLEQYLQVSDTMFIDFVRFLLNTNPRRRPTARQALKHPWLSHVYDSQ 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00067 723 Gene3D Phosphorylase Kinase; domain 1 408 495 - -
Accr4g00067 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Accr4g00067 723 FunFam Putative serine/threonine-protein kinase dyrk2 408 495 - -
Accr4g00067 723 MobiDBLite consensus disorder prediction 70 93 - -
Accr4g00067 723 Gene3D Transferase(Phosphotransferase) domain 1 468 716 - -
Accr4g00067 723 Pfam Protein kinase domain 416 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00067 723 MobiDBLite consensus disorder prediction 78 93 - -
Accr4g00067 723 CDD PKc_DYRK_like 414 716 - -
Accr4g00067 723 ProSiteProfiles Protein kinase domain profile. 414 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00067 723 FunFam Serine/threonine-protein kinase ppk15 493 717 - -
Accr4g00067 723 PANTHER DUAL SPECIFICITY PROTEIN KINASE 109 717 - -
Accr4g00067 723 SMART serkin_6 414 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00067 723 SUPERFAMILY Protein kinase-like (PK-like) 403 720 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00067 Accr-Chr4 812652 816947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00067 411 711 MAP Kinase Gene Family AT5G19010 31.464 5.69e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Accr4g00067 Pkinase 4.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00067 - - gmx:100783988 1057.74