Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00058 ATGGCAAAATACTATGACATTGATGACATCATCACAGAAGAAGAGATTTTATCAGTTATATTCCAAAAGGCTGCATCCGGAGTGGGAATAGATCCCAGTTCTGAAACTGGCTATATTGAAACAGGTTCGAAAGTGGAGGTGCCCTTCTGGCTTTCTCATGAGCTTCAATTGAGACAAGTAGTATCTATCAATATTCCCTCTTGTTTTGATCAAAAAACAAGACTCGAGATTCAGGCTGATTGCGCTAGTGTGGATCTGAGGTCTCGTTGTCCATTCTTTTATGAATTTGGATGCAAGATTGCACCTGTGGTTGGTGATCGGACCATTGGGTTTCTTCTCTTGTCTGCATTTAAGAATAGGTATAAGGAAATCCTTACCAAGGCACATTCTGCAGCATTTTCATCTGCTTCCAAATTCTTGTCAGTTCTAACAAAAGAAGAGATCAATTTGTATGATGCGGCTCAATCCTCAATGACATCCTTCAAGAAATGGCGAATGGGGGGACCCAGATTTCAGAAAGCCTCTGTTCTTGGAAGAAAAAGGAGATCAACTGAATAA 558 0.405 MAKYYDIDDIITEEEILSVIFQKAASGVGIDPSSETGYIETGSKVEVPFWLSHELQLRQVVSINIPSCFDQKTRLEIQADCASVDLRSRCPFFYEFGCKIAPVVGDRTIGFLLLSAFKNRYKEILTKAHSAAFSSASKFLSVLTKEEINLYDAAQSSMTSFKKWRMGGPRFQKASVLGRKRRSTE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00058 185 Pfam GINS complex protein 45 148 IPR021151 -
Accr4g00058 185 Gene3D - 2 166 IPR038437 -
Accr4g00058 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Accr4g00058 185 PANTHER UNCHARACTERIZED 1 183 IPR010492 -
Accr4g00058 185 CDD GINS_B_Psf3 4 66 - -
Accr4g00058 185 CDD GINS_A_psf3 61 167 - -
Accr4g00058 185 SUPERFAMILY PriA/YqbF domain 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00058 Accr-Chr4 735316 737668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00058 1 184 Core DNA Replication Machinery Family AT3G55490 70.109 1.39e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00058 K10734 - qsa:O6P43_020202 291.197