Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00051 ATGGCGGTGAAGCCGTGGAAAGCAGCGTACGAAGCAAAGTTGTGGAAGCTTCTGAAAGAGTACGGGCAAATACTGGTGGTATCATCCGACAATGTTAAAGCCAACCAACTTCAAAATATCCGAAGGGATCTTCATGAGGACTCTGTGATGGTGCTGGGTAAGAATACCTTAAAGCGGCGATCTATCAAAATGGATGCTGACTCCTCCGGCAACAAGGCTTTCCTCAACCTTCCCCCACTTCTTGTTGGTAATGTGGGGTTAATTTTCACAAAAGCTGACTTGAGGGAGCTGAGCGAAGTGGTTGCCAAGTACGAGGTTGTGGAGCCTCATCTCATGTGCCCCAAGTTCATGTCATATGACTCGTACCGCAATTGTCATTTTGTGAGATCGAGAGACTTACCTTTGAGCCTTATGTGTTGTCGTCAACTATTTCCGGAGACAGCTAATCCTCTTCTATTGTCTCCGAGGTTCCTGCCCCAGAATGATTGCTTTTTGACAAGATCAAGGCAGTTTTTGATCATGAGTATATGGGCTCCCCTTCTTCATTTTGCCGGCACATTATGA 564 0.4628 MAVKPWKAAYEAKLWKLLKEYGQILVVSSDNVKANQLQNIRRDLHEDSVMVLGKNTLKRRSIKMDADSSGNKAFLNLPPLLVGNVGLIFTKADLRELSEVVAKYEVVEPHLMCPKFMSYDSYRNCHFVRSRDLPLSLMCCRQLFPETANPLLLSPRFLPQNDCFLTRSRQFLIMSIWAPLLHFAGTL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00051 187 Pfam Ribosomal protein L10 4 104 IPR001790 -
Accr4g00051 187 SUPERFAMILY Ribosomal protein L10-like 3 104 IPR043141 -
Accr4g00051 187 Gene3D - 2 124 IPR043141 -
Accr4g00051 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00051 Accr-Chr4 693479 694856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00051 1 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 60.177 6.78e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00051 K02941 - nnu:104590633 139.428