Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00048 ATGCCTTCTTCTGCGCCCGCTCTGGTTTCCAAATCCACCGTTTTCCCTGATCGAAGCTCCACTCTCGGAGACCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCCTGCCACTATATCCAGAAGGGTTGCCTCTTCGCCCCTTCTCCCCCTTTTCATTCTTTCATTCCTCTCCTCAAGTCTGCCCTCTCTCGCACTCTCTCCTTCTTCCCTCCTCTTGCCGGCCGCTTGAAGACCGATTCCGATGGCTATGTCTACATCACCTGCAATGATGCTGGCGTCGATTTCCTTCATGTCATTGCCGCCGGATTCTTCATCCAAGACCTCCTGGCCCCTCCCGATGTCCCCGAATCTTTCAGGGAATTCTTCGCTTTTGACAGGAAAGTTAGTTACAGCGGTCATTTCAGCCCGATTTTGGCCGTTCAGGTCACCGAGCTGGCTGACGGTGTTTTCATCGGCTGCTCCGTCAACCACGCCGTTACAGATGGCACCTCCTTCTGGAATTTCTTCAATACTTTCGCCCAAGTCTTCAGAGGTGTCAACCATATTTCCAAGGTGCCGGACTTCCACCGGGAGTCGGTTCTCATCTCGAAGGTGGTGCTCCGTTTGCCGGAAGGTGGGCCGAAGGTCACCTTCAACGCCAACGGCCTGTTGCGGGAGCGAATTTTCAGCTTCAGCCGCGAAGCAATTCAAAAGCTGAAAGCCAAAACGAATTGCAGGAAATGGACGGCTGACGATAACTGGGATGTCATTAGCGCAGCAGAGTTGATGGGGAAGCAGAGCAACGATCCTTACGAGAAGGAGAACAGGGTGAAGAGTGCAGGCTCTGAAACGGGGAACATATCATCGTTTCAGTCGCTCTGCGCACTGCTCTGGCGAGCGGTAACGCGCGCCAGGAAAATGCCAGCGTCGAAAACGACGACATTCAGAATGGCGGTTAACTGTCGGCACAGGCTAGAGCCTAAATTGGATCAGTACTACTTCGGGAATGCGATTCAGAGCATACCGACGTATGCGTCAGCAGGCGACGTGGTTTTGACGGATTTGCGGTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCGCACGACGACGCAACGGTGAGACGGTACGTGAACGAGTGGGAGAGTAACCCGAGGTGCTTCCCGCTGGGGAATCCTGACGGCGCATCCATCACCATGGGGAGCTCGCCGAGATTCCCAATGTACGACAATGATTTCGGGTGGGGCAGGCCAGTGGCAATTCGGAGCGGAGGGGCGAATAAATTTGACGGGAAAATATCGGCATTTCCGGGCAGAGAAGGCAGCGGGAGCGTTGATTTGGAGGTGGTGTTGGAGCCGGAAACCATGGCGGGATTGGAGTCTGACGAGGAATTCATGCGATACGCTTCGTCCTTTGAGTTATAG 1407 0.5473 MPSSAPALVSKSTVFPDRSSTLGDLKLSVSDLPMLSCHYIQKGCLFAPSPPFHSFIPLLKSALSRTLSFFPPLAGRLKTDSDGYVYITCNDAGVDFLHVIAAGFFIQDLLAPPDVPESFREFFAFDRKVSYSGHFSPILAVQVTELADGVFIGCSVNHAVTDGTSFWNFFNTFAQVFRGVNHISKVPDFHRESVLISKVVLRLPEGGPKVTFNANGLLRERIFSFSREAIQKLKAKTNCRKWTADDNWDVISAAELMGKQSNDPYEKENRVKSAGSETGNISSFQSLCALLWRAVTRARKMPASKTTTFRMAVNCRHRLEPKLDQYYFGNAIQSIPTYASAGDVVLTDLRWCAEQLNKNVKAHDDATVRRYVNEWESNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPVAIRSGGANKFDGKISAFPGREGSGSVDLEVVLEPETMAGLESDEEFMRYASSFEL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00048 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 460 - -
Accr4g00048 468 Pfam Transferase family 9 460 - -
Accr4g00048 468 Gene3D - 7 202 IPR023213 -
Accr4g00048 468 Gene3D - 218 460 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00048 Accr-Chr4 670119 671525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00048 58 454 Monolignol Biosynthesis Gene Families AT5G48930 28.306 8.86e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00048 - - gmx:100500612 716.457