Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00034 ATGACTGAGGCTGGCCCTGCCGCCGCCTCTCCCTCCCCCTCTCCCACTCCTTCCCTCGAACCTCCCCACGACTCGGAGGTCGCCGCTTCTACCGACTTCGAACCCGGGGTGGGCGATGCCGACTTTTCTGGACTTGGAGACTCAAACGTAGCTGGCCGTGTCAAGGGACCCTGGTCCCCAGAGGAGGATGCCGTTCTCGGTCGATTGGTTGCCCAGTTTGGGGCAAGGAATTGGAGCATGATCGCGCGAGGGATACCCGGTCGCTCCGGCAAGTCGTGCCGTCTCCGTTGGTGTAATCAACTTGACCCCGGTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGATCGTATTATAGTTGCAGCCCATGCAATGCATGGAAACAAATGGGCAGCAATAGCTAGGCTTCTTCCAGGAAGAACAGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGCGCAAGTGCTTGGATCTTGGAAGATACGTCCCAGTGGGTGCTGGCATGCTGGAAGAGGGCAGCCTTGAGGCCCCTGACAAAATAAAGGCATCTTCTGAAGAAACCATGTCAGCAGGGGATATCAATTCATTGAATCCTACACAAATTGAAAATGTCGGGATGGATGGTGGTATTATTCAGCATGAGGATAGTCTTCCAAGAGACGATGGTGCTGAAGTGGAGGAACATCCTACCCTGTGTCAACCAGTAGCACGTGTTAGTGCATTTAGTGTCTATAATCCTCCAAGCAGGACAACAGCTGGATCGACATATTCAAGGATGCTCCCAATGCAGGGCCCTTTGATCCAATCGTCCAAAGTTGAAGTAGGAGCCTGCAAGATATTTGAAGATGTTGGCTGTGAGCCCATGGTTCCGGTGCAATGTGGTCATGGCTGCTGTTCTTCAAGTTCTCGGGAAAGCCATTATCGTGGTTCGCTACTAGGTCCTGAGTTCATTGACTATTTGGAGCTGCCCCCCTTTTCAAGTCATGAATTGATCTCTATAGCTACAGATTTGAACAGTATTGCTTGGATCAAGAGTGGCCTAGATGCCAGAGTAACGGAGAATGCAGCAAACTCAACAGCATCTCAAGGTGTTGCTACTGCATTTCAAAATGGCTTCTTTGAGGAGGGAGGGAGCAAGTTTGTGGGTATGATGCAAGATATGTTATCAACGCAGATGTCTAGTCATCCATATGCAATGCCTGCAGAGGTTTGA 1215 0.4988 MTEAGPAAASPSPSPTPSLEPPHDSEVAASTDFEPGVGDADFSGLGDSNVAGRVKGPWSPEEDAVLGRLVAQFGARNWSMIARGIPGRSGKSCRLRWCNQLDPGVKRKPFTEEEDRIIVAAHAMHGNKWAAIARLLPGRTDNAIKNHWNSTLKRKCLDLGRYVPVGAGMLEEGSLEAPDKIKASSEETMSAGDINSLNPTQIENVGMDGGIIQHEDSLPRDDGAEVEEHPTLCQPVARVSAFSVYNPPSRTTAGSTYSRMLPMQGPLIQSSKVEVGACKIFEDVGCEPMVPVQCGHGCCSSSSRESHYRGSLLGPEFIDYLELPPFSSHELISIATDLNSIAWIKSGLDARVTENAANSTASQGVATAFQNGFFEEGGSKFVGMMQDMLSTQMSSHPYAMPAEV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00034 404 ProSiteProfiles Myb-like domain profile. 55 101 IPR001005 -
Accr4g00034 404 Gene3D - 54 106 - -
Accr4g00034 404 PANTHER MYB PROTEIN-RELATED 55 208 - -
Accr4g00034 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 101 IPR017930 -
Accr4g00034 404 ProSiteProfiles Myb-like domain profile. 102 152 IPR001005 -
Accr4g00034 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 156 IPR017930 -
Accr4g00034 404 SUPERFAMILY Homeodomain-like 52 148 IPR009057 -
Accr4g00034 404 CDD SANT 57 99 IPR001005 -
Accr4g00034 404 Gene3D - 109 155 - -
Accr4g00034 404 MobiDBLite consensus disorder prediction 1 45 - -
Accr4g00034 404 FunFam MYB transcription factor 55 106 - -
Accr4g00034 404 FunFam Transcription factor MYB44 109 155 - -
Accr4g00034 404 CDD SANT 109 152 IPR001005 -
Accr4g00034 404 SMART sant 54 103 IPR001005 -
Accr4g00034 404 SMART sant 106 154 IPR001005 -
Accr4g00034 404 Pfam Myb-like DNA-binding domain 107 151 IPR001005 -
Accr4g00034 404 Pfam Myb-like DNA-binding domain 55 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00034 Accr-Chr4 579967 584110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00034 50 389 MYB Transcription Factor Family AT3G55730 48.442 6.16e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr4g00034 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00034 K09422 - gmx:100781228 483.026