Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00023 ATGGAAAAGGCGTTTCTCATCTTCACGACGGCGCTGCTAACATGCGCCGCCTCTGGAGTGTCCTTGAAGCTCTGCCCAAACTGCGGCAACACCTCAGTGCCGTACCCCCTCAGCACCTCAGCCGAGTGCGGTGACCCGTCCTACAAGATCCGGTGCAGTTCCGGGTCCCTCATGTTGGACACCCTCAACAACTCCTACCCCATCCACTCCATCCACCCCCAAACCCAACGCCTCCTCATCCGACCCGCCTCCCTCCTATCCAACACCTGCGTCACCTCCGATAAGATCCACGGCGGCATCCTCCTCAACAGCACCCTCCCCTTCAACATCACCAGCAGCAACACCATCCTCTACTTCAACTGTACCCCCATCCTCCTCCTTTCCCCCTTGAACTGCTCCTTCTCCAGCTTCTGCCACACCTACATCAACGCCACCCCAAGCGCCTCTCCCTGCCTCCTCGCCCCTATCTGCTGTACTTTCAGGGCTGGTGGCTCCAGCAACTCCTACATGATCCGCGTCCGCGATGCGGGATGCAGCGCTTACTCCAGTTTCGTCAACCTCAACCCCTCTCTGCCGCTCACCAGCTGGCCTGAACCGGGCCTCGAAATTCAGTGGGTGTCGCCGCCTGAACCGCTCTGTGGGTCCCAGTTGGATTGCGAGGGCGGCAACTCCACTTGTGCGCCGGACCCATCCAGAAGCGGCGTCAAGAGGTGCTTTTGTAACGCCGGCCTTGTGTGGGACCCTATTCAAGGGGTGTGCGCTGAAAAAATCACATGTCAGCAGAGTCCGGATGGTTGTGGCGGCTCCGATCGAACTGCACTAATAGCAGGTTTGACGAGTGGGATTAGCGCAGCAGTGATAATAGCCCTTGTTGCGGTTCTGCTCTACAAACGGCACAGACGAGTGAAGGAGGCCCAAGAACGGCTGATCAGAGAGCGGGAGGGTATCCTGAATGCGAGTGGCGCAGGCAGAGCCGCAAAGCTCTTCTCCGGCAAAGAGCTGAAGAAAGCGACCAACAACTTCTCCAGAGACCGCCTCCTAGGCGCCGGCGGCTACGGCGAAGTCTACAAAGGCGTCCTCCAGGACGGCACCGCCGTAGCCGTCAAATGCGCAAAACTAGGCAATGCAAAAAGCACCGACCAAGTGCTAAACGAGGTGCGCATATTGTGCCAAGTCCACCACCGTAACCTCGTCGGTCTTCTGGGTTGCTGCGTGGAGTTAGACCAACCCATGATGGTGTATGAGTTTGTAGAGAACGGCACTGTCCTCGATCACCTGTCCAAAGGGCGAAGCTCTCTCACCTGGTCTCATCGCCTTCGAGTGGCTCACGACACGGCCCAAGGTCTGGCATATCTTCACTTCTCCGCCGTGCCTCCTATATACCACAGGGACGTCAAGTCCAGTAACATTCTGCTAGATAATAAATTAAACGCAAAGGTTTCGGATTTTGGCCTGTCGAGGCTGGCCGAAACAGATTTGAGCCACATCTCAACGTGCGCCCAGGGGACGCTGGGGTATTTGGATCCAGAGTATTACAGGAATTACCAGTTGACGGATAAGAGCGATGTGTATAGTTTTGGGGTGGTGCTGTTAGAGCTGTTGACGGCCCAGAGGGCTATAGATTTCAACAGGCCAGCGGATGATGTGAACTTGGCGGTGTATGTGCACAGGATGGCGGAGGAAGAGAAGGTGATGGAGGTCATAGAACCGGGGCTGAGAAATGGGGCCACCACTTTGGAGGTGGACACAATGAAGGCGTTGGCGTTTTTGGCTCTGGGATGCTTGGAGGAGCGGAGGCAGAACCGACCTTCCATGAAGGAGGTGGTTGAGGAGATTGAGTATATCATTGGTATTGCCACCTCCAAACACGCCCAAAGCTAG 1881 0.5641 MEKAFLIFTTALLTCAASGVSLKLCPNCGNTSVPYPLSTSAECGDPSYKIRCSSGSLMLDTLNNSYPIHSIHPQTQRLLIRPASLLSNTCVTSDKIHGGILLNSTLPFNITSSNTILYFNCTPILLLSPLNCSFSSFCHTYINATPSASPCLLAPICCTFRAGGSSNSYMIRVRDAGCSAYSSFVNLNPSLPLTSWPEPGLEIQWVSPPEPLCGSQLDCEGGNSTCAPDPSRSGVKRCFCNAGLVWDPIQGVCAEKITCQQSPDGCGGSDRTALIAGLTSGISAAVIIALVAVLLYKRHRRVKEAQERLIREREGILNASGAGRAAKLFSGKELKKATNNFSRDRLLGAGGYGEVYKGVLQDGTAVAVKCAKLGNAKSTDQVLNEVRILCQVHHRNLVGLLGCCVELDQPMMVYEFVENGTVLDHLSKGRSSLTWSHRLRVAHDTAQGLAYLHFSAVPPIYHRDVKSSNILLDNKLNAKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQRAIDFNRPADDVNLAVYVHRMAEEEKVMEVIEPGLRNGATTLEVDTMKALAFLALGCLEERRQNRPSMKEVVEEIEYIIGIATSKHAQS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00023 626 FunFam Wall-associated receptor kinase-like 20 303 416 - -
Accr4g00023 626 FunFam Wall-associated receptor kinase-like 20 417 625 - -
Accr4g00023 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Accr4g00023 626 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Accr4g00023 626 Pfam Protein tyrosine and serine/threonine kinase 344 611 IPR001245 GO:0004672|GO:0006468
Accr4g00023 626 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00023 626 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 615 IPR044652 GO:0004672
Accr4g00023 626 Gene3D Transferase(Phosphotransferase) domain 1 417 625 - -
Accr4g00023 626 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g00023 626 SUPERFAMILY Protein kinase-like (PK-like) 326 612 IPR011009 -
Accr4g00023 626 CDD STKc_IRAK 347 613 - -
Accr4g00023 626 Gene3D Phosphorylase Kinase; domain 1 318 416 - -
Accr4g00023 626 Pfam Wall-associated receptor kinase galacturonan-binding 25 79 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00023 Accr-Chr4 490184 492297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00023 25 626 Receptor kinase-like Gene Family AT5G02070 51.691 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr4g00023 PK_Tyr_Ser-Thr 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00023 - - gmx:100305415 943.34