Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02853 ATGAGTTGCTTTCCGTGTTGTGCGTCAAAAGAAAGGATCAACCGGAAGGCATTGCAAAAGAGCAGCAAGGAGTACCATGCTTCAAAATCTATAGCCTCGTTTGCCAACGTTTCTTTTAAAAGTGATGCCAGTAGGCAAAGGTACATAACGGAAGAAATTAAGAAGATTGGAAACGGAAATATTACAGCTAAAATCTTCAGCTATCGAGAGCTACGCGTGGCAACTCAGAATTTTCACCAGGACAACCTAATTGGTGAAGGAGGCTTCGGCAGGGTATACAAAGGATTTCTCGAAAGCATGAATCAAGTTGTTGCGGTGAAGCAACTTGATAGGAATGGGTTTCAGGGAAACAGAGAATTTCTCGTAGAGGTTTTGCTTTTGAGTCTCTTGAGCCACCCCAACCTCGTCAATTTGGTCGGTTATTGTGCTGATGGCGATCAGAGAATTTTGGTCTACGAGTATATGGTCAATGGATCTTTAGAAGATCACCTCTTTGGTAAGTCAAATGAAGTCTTCTCTTACTCTTCGCATTATTAG 537 0.4209 MSCFPCCASKERINRKALQKSSKEYHASKSIASFANVSFKSDASRQRYITEEIKKIGNGNITAKIFSYRELRVATQNFHQDNLIGEGGFGRVYKGFLESMNQVVAVKQLDRNGFQGNREFLVEVLLLSLLSHPNLVNLVGYCADGDQRILVYEYMVNGSLEDHLFGKSNEVFSYSSHY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02853 178 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Accr3g02853 178 Pfam Protein tyrosine and serine/threonine kinase 80 171 IPR001245 GO:0004672|GO:0006468
Accr3g02853 178 Gene3D Phosphorylase Kinase; domain 1 14 154 - -
Accr3g02853 178 ProSiteProfiles Protein kinase domain profile. 78 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02853 178 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Accr3g02853 178 PANTHER OS07G0668900 PROTEIN 3 168 - -
Accr3g02853 178 SUPERFAMILY Protein kinase-like (PK-like) 56 170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02853 Accr-Chr3 59243685 59245997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02853 1 165 Glycoside Hydrolase AT3G07070 53.846 1.95e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr3g02853 PK_Tyr_Ser-Thr 8.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02853 - - qsu:111998873 254.218