Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr3g02830 | ATGGGGATTCAGACAATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCCTCATTGACAAGGCAAAGCTCATGGTATAGTCTTACACTTGATGAGGTTAAAAATCAACTAGGAGACCTGGGGAAGCCATTGGGAAGCATGAACCTTGATGAACTTCTTCAGAGTGTATGGATTGCTGAAGAAAGCAAGTCCATAGGGGTAGAAAATGAGAACATGTCATCATCATCTTCTCTTCAACGTCAGGCCAGTCTGACCCTGGCCCAGGCTTTGAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATTCGACAAGGTCAGAAGAAACGATTTTCAGAGGATATAAGAGGTCCGGATAGAGAGATGACTCTTGGTGAAACAACCTTGGAGGATTTCTTGGTACAAGCAGGGCTTTTTGCCGAGGCTTCTATTAATACATCTATGGGGTTGGATACTTTGGAAGTCACCACTCCTCAAAGTCTTCAACATAGGACAGGCTTGTCACCCTCCCCGTCATTTGGCAGTTTATCTGATACAAGACCAGGCCGCAAAAGGGACGCTCCAGATGCATATGAGAAAACCTTGGAGAGGAGGCTGAGGAGAAAAATCAAGAACAGAGAATCTGCTGCCCGTTCACGAGCCAGAAAGCAGGCTTACCATAATGAATTGGTTAGCAAGGTTTCTCGTCTAGAAGAAGAAAATACAAAGCTCAAGAAAGAAAAGGAGTTTGAACAGAGGTTGGCATCTGAAGCATCACCTGAACTGACATATCAGCTTCGAAGATCGAGTTCTGCATCTTTCTGA | 810 | 0.4469 | MGIQTMGSQGNGQQSHLQPSSLTRQSSWYSLTLDEVKNQLGDLGKPLGSMNLDELLQSVWIAEESKSIGVENENMSSSSSLQRQASLTLAQALSGKTVDDVWREIRQGQKKRFSEDIRGPDREMTLGETTLEDFLVQAGLFAEASINTSMGLDTLEVTTPQSLQHRTGLSPSPSFGSLSDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENTKLKKEKEFEQRLASEASPELTYQLRRSSSASF | 269 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr3g02830 | 269 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 197 | 250 | - | - | |
Accr3g02830 | 269 | Pfam | bZIP transcription factor | 199 | 243 | IPR004827 | GO:0003700|GO:0006355 | |
Accr3g02830 | 269 | MobiDBLite | consensus disorder prediction | 253 | 269 | - | - | |
Accr3g02830 | 269 | Coils | Coil | 222 | 249 | - | - | |
Accr3g02830 | 269 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 22 | 266 | IPR043452 | GO:0003700|GO:0045893 | |
Accr3g02830 | 269 | MobiDBLite | consensus disorder prediction | 242 | 269 | - | - | |
Accr3g02830 | 269 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 202 | 217 | IPR004827 | GO:0003700|GO:0006355 | |
Accr3g02830 | 269 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Accr3g02830 | 269 | MobiDBLite | consensus disorder prediction | 160 | 179 | - | - | |
Accr3g02830 | 269 | SUPERFAMILY | Leucine zipper domain | 199 | 248 | IPR046347 | GO:0003700|GO:0006355 | |
Accr3g02830 | 269 | Gene3D | - | 197 | 251 | - | - | |
Accr3g02830 | 269 | CDD | bZIP_plant_BZIP46 | 199 | 248 | - | - | |
Accr3g02830 | 269 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 197 | 242 | IPR004827 | GO:0003700|GO:0006355 | |
Accr3g02830 | 269 | SMART | brlzneu | 195 | 263 | IPR004827 | GO:0003700|GO:0006355 | |
Accr3g02830 | 269 | MobiDBLite | consensus disorder prediction | 160 | 194 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr3g02830 | Accr-Chr3 | 58914581 | 58918966 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr3g02830 | 21 | 269 | bZIP Transcription Factor Family | AT3G56850 | 46.154 | 4.41e-62 | 196 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Accr3g02830 | bZIP_1 | 2.1e-11 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr3g02830 | K14432 | - | gmx:100798549 | 401.364 |